C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00054P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141574-ENSG00000182459 CGP 9606 17:82321024-82363776
GeneTranscriptPositionBiotype
ENSG00000141574 (SECTM1)
secreted and transmembrane 1
ENST00000269389 (SECTM1-001) 82321024-82333998 protein_coding
ENST00000580437 (SECTM1-006) 82321887-82333762 protein_coding
ENST00000581691 (SECTM1-002) 82322879-82334074 protein_coding
ENST00000581864 (SECTM1-007) 82322115-82333748 nonsense_mediated_decay
ENST00000581954 (SECTM1-008) 82324853-82328506 protein_coding
ENST00000582290 (SECTM1-004) 82324729-82333766 protein_coding
ENST00000582563 (SECTM1-003) 82322965-82333769 protein_coding
ENST00000583093 (SECTM1-005) 82323280-82333763 protein_coding
ENSG00000182459 (TEX19)
testis expressed 19
ENST00000333437 (TEX19-001) 82359247-82363776 protein_coding
ENSG00000278964 (RP13-20L14.2)
ENST00000623835 (RP13-20L14.2-001) 82362349-82363196 TEC
CIL_00054P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025165-ENSMUSG00000039337 CGP 10090 11:121067407-121118677
GeneTranscriptPositionBiotype
ENSMUSG00000025165 (Sectm1a)
secreted and transmembrane 1A
ENSMUST00000026162 (Sectm1a-001) 121067407-121081220 protein_coding
ENSMUST00000100126 (Sectm1a-003) 121067917-121081136 protein_coding
ENSMUST00000106119 (Sectm1a-002) 121067407-121081139 protein_coding
ENSMUST00000106120 (Sectm1a-005) 121067935-121081130 protein_coding
ENSMUST00000149917 (Sectm1a-004) 121069036-121081125 processed_transcript
ENSMUSG00000039337 (Tex19.2)
testis expressed gene 19.2
ENSMUST00000039146 (Tex19.2-001) 121116215-121118677 protein_coding
ENSMUSG00000082510 (Gm11793)
predicted gene 11793
ENSMUST00000120433 (Gm11793-001) 121106147-121107127 processed_pseudogene
ENSMUSG00000084853 (Gm11791)
predicted gene 11791
ENSMUST00000139327 (Gm11791-001) 121096641-121097207 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054P_0001ENSG00000141574ENST00000269389ENST00000580437ENST00000581691ENST00000581864ENST00000581954ENST00000582290ENST00000582563ENST00000583093ENSG00000182459ENST00000333437ENSG00000278964ENST00000623835CIL_00054P_0002ENSMUSG00000025165ENSMUST00000026162ENSMUST00000100126ENSMUST00000106119ENSMUST00000106120ENSMUST00000149917ENSMUSG00000039337ENSMUST00000039146ENSMUSG00000082510ENSMUST00000120433ENSMUSG00000084853ENSMUST00000139327
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054P_0001ENSG00000141574ENST00000269389ENST00000580437ENST00000581691ENST00000581864ENST00000583093ENSG00000182459ENST00000333437ENSG00000278964ENST00000623835CIL_00054P_0002ENSMUSG00000025165ENSMUST00000026162ENSMUST00000100126ENSMUST00000106119ENSMUST00000106120ENSMUST00000149917ENSMUSG00000039337ENSMUST00000039146ENSMUSG00000082510ENSMUST00000120433ENSMUSG00000084853ENSMUST00000139327
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141574 ENST00000269389 3.310±0.00 2.216±0.00 N/A 0.651±0.00 2.423±0.59 N/A 0.081±0.00 0.497±0.00 0.738±0.32 2.501±0.00 0.714±0.00 2.909±2.25 5.495±2.81 0.383±0.19
ENST00000580437 4.784±0.00 6.046±0.00 N/A 0.387±0.10 4.858±0.00 4.543±0.00 0.815±0.00 1.341±0.00 0.411±0.00 N/A 0.787±0.00 3.982±0.88 2.770±1.31 2.483±0.00
ENST00000581691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.529±0.00
ENST00000581864 6.309±0.00 10.345±0.00 N/A 0.498±0.00 N/A 4.378±2.52 N/A N/A 0.557±0.05 N/A 1.196±0.00 5.931±4.34 2.726±0.00 0.978±0.67
ENST00000581954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583093 N/A N/A N/A N/A N/A N/A N/A N/A 0.992±0.00 N/A N/A N/A N/A N/A
ENSG00000182459 ENST00000333437 N/A 0.029±0.00 N/A 0.022±0.00 N/A N/A N/A 0.010±0.00 N/A N/A N/A 0.044±0.02 N/A 14.116±3.99
ENSG00000278964 ENST00000623835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.03 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025165 ENSMUST00000026162 0.238±0.13 0.111±0.00 0.121±0.09 N/A 0.202±0.14 0.402±0.00 N/A 0.516±0.15 0.325±0.21 N/A 0.033±0.00 0.669±0.39 0.521±0.37 N/A
ENSMUST00000100126 N/A N/A N/A 0.020±0.00 0.239±0.07 1.356±0.00 N/A N/A 0.338±0.00 0.060±0.00 0.102±0.00 0.894±0.31 N/A N/A
ENSMUST00000106119 0.068±0.05 0.277±0.16 N/A N/A 0.156±0.00 0.725±0.00 N/A 0.408±0.30 0.356±0.04 0.034±0.00 0.097±0.02 0.399±0.13 N/A 0.357±0.00
ENSMUST00000106120 0.168±0.06 0.067±0.01 N/A 0.013±0.00 0.154±0.12 1.377±0.42 N/A 0.563±0.05 0.100±0.00 N/A N/A 0.744±0.25 0.290±0.00 N/A
ENSMUST00000149917 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039337 ENSMUST00000039146 N/A N/A 0.012±0.01 N/A N/A 0.039±0.00 N/A 0.021±0.01 0.070±0.04 N/A N/A 0.218±0.11 0.072±0.02 10.708±2.70
ENSMUSG00000082510 ENSMUST00000120433 0.190±0.13 0.306±0.18 0.524±0.44 0.165±0.15 0.405±0.49 0.138±0.05 0.057±0.02 1.378±0.43 0.402±0.64 0.155±0.00 0.044±0.00 0.124±0.10 0.087±0.04 0.128±0.07
ENSMUSG00000084853 ENSMUST00000139327 N/A N/A N/A N/A N/A N/A N/A 0.277±0.15 0.035±0.00 N/A N/A 0.578±0.02 0.263±0.12 N/A

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