C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000556_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155714-ENSG00000185716 CGP 9606 16:21983865-22087534
GeneTranscriptPositionBiotype
ENSG00000155714 (PDZD9)
PDZ domain containing 9
ENST00000424898 (PDZD9-003) 21983865-22001110 protein_coding
ENST00000523914 (PDZD9-001) 21983865-22001110 nonsense_mediated_decay
ENST00000537222 (PDZD9-002) 21983865-22001098 protein_coding
ENSG00000260395 (CTD-2649C14.1)
ENST00000562640 (CTD-2649C14.1-001) 21998310-21999656 processed_pseudogene
CIL_000556_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030887-ENSMUSG00000046096 CGP 10090 7:120659296-120734854
GeneTranscriptPositionBiotype
ENSMUSG00000030884 (Uqcrc2)
ubiquinol cytochrome c reductase core protein 2
ENSMUST00000033176 (Uqcrc2-001) 120635176-120659478 protein_coding
ENSMUST00000123704 (Uqcrc2-003) 120635515-120645242 processed_transcript
ENSMUST00000131191 (Uqcrc2-005) 120651280-120657859 retained_intron
ENSMUST00000137808 (Uqcrc2-004) 120644918-120650930 retained_intron
ENSMUST00000148958 (Uqcrc2-006) 120637662-120659161 processed_transcript
ENSMUST00000150675 (Uqcrc2-002) 120635240-120643217 processed_transcript
ENSMUSG00000030887 (Pdzd9)
PDZ domain containing 9
ENSMUST00000033178 (Pdzd9-001) 120659296-120670343 protein_coding
ENSMUST00000127845 (Pdzd9-002) 120659354-120670250 processed_transcript
ENSMUSG00000046096 (BC030336)
cDNA sequence BC030336
ENSMUST00000060175 (BC030336-201) 120677620-120734854 protein_coding
ENSMUSG00000097343 (9030407P20Rik)
RIKEN cDNA 9030407P20 gene
ENSMUST00000180933 (9030407P20Rik-201) 120673439-120677520 lincRNA
ENSMUST00000180977 (9030407P20Rik-202) 120673735-120677560 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000556_0001ENSG00000155714ENST00000424898ENST00000523914ENST00000537222ENSG00000260395ENST00000562640CIL_000556_0002ENSMUSG00000030884ENSMUST00000033176ENSMUST00000123704ENSMUST00000131191ENSMUST00000137808ENSMUST00000148958ENSMUST00000150675ENSMUSG00000030887ENSMUST00000033178ENSMUST00000127845ENSMUSG00000046096ENSMUST00000060175ENSMUSG00000097343ENSMUST00000180933ENSMUST00000180977
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000556_0001ENSG00000155714ENST00000424898ENST00000523914ENST00000537222ENSG00000260395ENST00000562640CIL_000556_0002ENSMUSG00000030884ENSMUST00000033176ENSMUST00000123704ENSMUST00000148958ENSMUSG00000030887ENSMUST00000033178ENSMUST00000127845ENSMUSG00000046096ENSMUST00000060175ENSMUSG00000097343ENSMUST00000180933ENSMUST00000180977
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155714 ENST00000424898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.689±4.41
ENST00000523914 0.226±0.00 0.254±0.00 N/A 0.178±0.00 0.194±0.00 0.103±0.00 0.008±0.00 0.068±0.00 0.023±0.00 0.114±0.00 N/A N/A 0.034±0.00 1.642±0.00
ENST00000537222 N/A N/A N/A 0.038±0.00 N/A 0.252±0.00 N/A N/A 0.043±0.00 0.332±0.00 0.107±0.00 0.163±0.11 0.060±0.03 2.526±0.00
ENSG00000260395 ENST00000562640 0.026±0.00 0.041±0.00 N/A 0.055±0.00 N/A N/A N/A 0.121±0.00 N/A N/A N/A N/A N/A 0.060±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030884 ENSMUST00000033176 78.112±10.68 27.850±9.20 75.835±11.20 45.388±18.71 58.025±26.64 55.605±6.13 237.727±63.31 139.793±13.14 77.028±29.02 29.949±3.27 168.105±46.02 32.177±20.02 61.272±43.49 26.845±9.53
ENSMUST00000123704 N/A N/A N/A 200.101±0.00 N/A N/A N/A N/A N/A N/A N/A 162.845±0.00 140.925±48.90 53.300±0.00
ENSMUST00000131191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 134.437±0.00 N/A N/A N/A
ENSMUST00000150675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030887 ENSMUST00000033178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 41.661±17.99
ENSMUST00000127845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.276±2.74
ENSMUSG00000046096 ENSMUST00000060175 4.254±0.43 9.260±2.14 1.496±0.73 2.360±0.93 2.793±0.68 1.186±0.26 2.329±0.46 3.333±0.14 2.404±0.84 4.920±0.10 1.995±0.66 3.098±0.86 1.979±0.95 3.365±1.85
ENSMUSG00000097343 ENSMUST00000180933 0.337±0.00 0.090±0.00 N/A 0.312±0.07 0.171±0.02 0.166±0.02 0.100±0.02 0.088±0.01 0.104±0.05 0.113±0.04 0.113±0.04 0.105±0.00 0.149±0.10 0.167±0.02
ENSMUST00000180977 0.674±0.27 0.345±0.12 1.261±0.40 1.813±0.82 0.481±0.28 0.443±0.08 0.361±0.04 0.647±0.09 0.284±0.10 0.452±0.28 0.416±0.12 0.601±0.27 0.343±0.20 1.296±0.48

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