C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005FN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038593-ENSDARG00000076787 CGP 7955 6:51775396-51984937
GeneTranscriptPositionBiotype
ENSDARG00000038593 (rspo4)
R-spondin family, member 4
ENSDART00000073843 (rspo4-201) 51775396-51784866 protein_coding
ENSDART00000149003 (rspo4-001) 51775415-51794096 protein_coding
ENSDARG00000076787 (angpt4)
angiopoietin 4
ENSDART00000109852 (angpt4-201) 51815743-51984937 protein_coding
ENSDART00000156256 (angpt4-001) 51883086-51981636 protein_coding
ENSDARG00000080312 (5S_rRNA)
5S ribosomal RNA
ENSDART00000118897 (5S_rRNA.35-201) 51897742-51897863 rRNA
CIL_0005FN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032852-ENSMUSG00000027460 CGP 10090 2:151842927-151945337
GeneTranscriptPositionBiotype
ENSMUSG00000027460 (Angpt4)
angiopoietin 4
ENSMUST00000028955 (Angpt4-001) 151911210-151945337 protein_coding
ENSMUSG00000032852 (Rspo4)
R-spondin family, member 4
ENSMUST00000042217 (Rspo4-001) 151842927-151874668 protein_coding
ENSMUSG00000086620 (Rspo4os)
R-spondin family, member 4, opposite strand
ENSMUST00000152229 (Rspo4os-001) 151865315-151866960 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FN_0001ENSDARG00000038593ENSDART00000073843ENSDART00000149003ENSDARG00000076787ENSDART00000109852ENSDART00000156256ENSDARG00000080312ENSDART00000118897CIL_0005FN_0002ENSMUSG00000027460ENSMUST00000028955ENSMUSG00000032852ENSMUST00000042217ENSMUSG00000086620ENSMUST00000152229
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FN_0001ENSDARG00000038593ENSDART00000073843ENSDART00000149003ENSDARG00000076787ENSDART00000109852ENSDART00000156256ENSDARG00000080312ENSDART00000118897CIL_0005FN_0002ENSMUSG00000027460ENSMUST00000028955ENSMUSG00000032852ENSMUST00000042217ENSMUSG00000086620ENSMUST00000152229
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038593 ENSDART00000073843 N/A N/A N/A 0.261±0.00 N/A N/A 0.359±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149003 N/A N/A N/A N/A N/A N/A 0.220±0.11 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000076787 ENSDART00000109852 N/A N/A N/A 2.739±1.02 N/A N/A 6.023±3.20 0.496±0.09 0.055±0.00 N/A 0.735±0.00 N/A N/A N/A
ENSDART00000156256 N/A N/A N/A N/A N/A N/A 3.746±0.00 0.441±0.00 N/A N/A 0.142±0.00 N/A N/A N/A
ENSDARG00000080312 ENSDART00000118897 N/A N/A N/A 135.865±0.00 N/A N/A N/A N/A N/A N/A 3.229±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027460 ENSMUST00000028955 1.162±0.43 0.592±0.27 1.046±0.24 0.033±0.01 0.264±0.10 0.767±0.36 0.352±0.08 0.459±0.17 0.065±0.04 1.290±0.32 0.077±0.03 8.606±3.81 3.026±1.41 0.888±0.36
ENSMUSG00000032852 ENSMUST00000042217 0.012±0.00 0.118±0.04 N/A 0.053±0.01 0.109±0.06 N/A 0.009±0.00 0.017±0.01 0.026±0.02 0.424±0.25 0.013±0.00 0.067±0.05 0.045±0.04 0.226±0.15
ENSMUSG00000086620 ENSMUST00000152229 0.026±0.00 N/A 0.034±0.00 0.036±0.02 N/A 0.056±0.00 0.024±0.00 0.027±0.00 0.021±0.01 0.042±0.01 N/A 0.099±0.06 0.058±0.06 0.046±0.02

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