C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005GX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000097444-ENSDARG00000087613 CGP 7955 22:4048993-4115913
GeneTranscriptPositionBiotype
ENSDARG00000087613 (timm44)
translocase of inner mitochondrial membrane 44 homolog (yeast)
ENSDART00000124457 (timm44-201) 4099828-4115913 protein_coding
ENSDARG00000097444 (CTXN1 (2 of 2))
cortexin 1
ENSDART00000153837 (CTXN1 (2 of 2)-001) 4048993-4075196 protein_coding
CIL_0005GX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178531-ENSG00000104980 CGP 9606 19:7924485-7943920
GeneTranscriptPositionBiotype
ENSG00000104980 (TIMM44)
translocase of inner mitochondrial membrane 44 homolog (yeast)
ENST00000270538 (TIMM44-001) 7926740-7943920 protein_coding
ENST00000595565 (TIMM44-009) 7926721-7932746 protein_coding
ENST00000595831 (TIMM44-003) 7926736-7943635 nonsense_mediated_decay
ENST00000595876 (TIMM44-002) 7928123-7943667 nonsense_mediated_decay
ENST00000597926 (TIMM44-007) 7932699-7943651 protein_coding
ENST00000598481 (TIMM44-013) 7927824-7931381 retained_intron
ENST00000598675 (TIMM44-008) 7932276-7933952 retained_intron
ENST00000598968 (TIMM44-011) 7926914-7931830 processed_transcript
ENST00000599650 (TIMM44-012) 7927049-7931599 retained_intron
ENST00000599939 (TIMM44-004) 7926718-7928944 retained_intron
ENST00000600000 (TIMM44-006) 7937798-7943666 retained_intron
ENST00000600748 (TIMM44-010) 7933764-7943636 retained_intron
ENSG00000178531 (CTXN1)
cortexin 1
ENST00000318978 (CTXN1-001) 7924485-7926166 protein_coding
CIL_0005GX_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048644-ENSMUSG00000002949 CGP 10090 8:4257648-4275913
GeneTranscriptPositionBiotype
ENSMUSG00000002949 (Timm44)
translocase of inner mitochondrial membrane 44
ENSMUST00000003029 (Timm44-001) 4259731-4275913 protein_coding
ENSMUST00000135755 (Timm44-004) 4266294-4267662 retained_intron
ENSMUST00000141195 (Timm44-003) 4260100-4267045 retained_intron
ENSMUST00000147831 (Timm44-006) 4266113-4266982 retained_intron
ENSMUST00000148672 (Timm44-005) 4259984-4260735 retained_intron
ENSMUST00000149827 (Timm44-002) 4259731-4275885 retained_intron
ENSMUST00000160371 (Timm44-007) 4259749-4275871 nonsense_mediated_decay
ENSMUST00000160549 (Timm44-008) 4267402-4275873 retained_intron
ENSMUST00000161143 (Timm44-009) 4267344-4275882 processed_transcript
ENSMUSG00000048644 (Ctxn1)
cortexin 1
ENSMUST00000053252 (Ctxn1-201) 4257648-4259274 protein_coding
ENSMUSG00000087876 (Gm26102)
predicted gene, 26102
ENSMUST00000157251 (Gm26102-201) 4274853-4275136 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GX_0001ENSDARG00000087613ENSDART00000124457ENSDARG00000097444ENSDART00000153837CIL_0005GX_0002ENSG00000104980ENST00000270538ENST00000595565ENST00000595831ENST00000595876ENST00000597926ENST00000598481ENST00000598675ENST00000598968ENST00000599650ENST00000599939ENST00000600000ENST00000600748ENSG00000178531ENST00000318978CIL_0005GX_0003ENSMUSG00000002949ENSMUST00000003029ENSMUST00000135755ENSMUST00000141195ENSMUST00000147831ENSMUST00000148672ENSMUST00000149827ENSMUST00000160371ENSMUST00000160549ENSMUST00000161143ENSMUSG00000048644ENSMUST00000053252ENSMUSG00000087876ENSMUST00000157251
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GX_0001ENSDARG00000087613ENSDART00000124457ENSDARG00000097444ENSDART00000153837CIL_0005GX_0002ENSG00000104980ENST00000270538ENST00000595565ENST00000595831ENST00000597926ENST00000598675ENST00000598968ENST00000599939ENST00000600000ENST00000600748ENSG00000178531ENST00000318978CIL_0005GX_0003ENSMUSG00000002949ENSMUST00000003029ENSMUST00000141195ENSMUST00000148672ENSMUST00000149827ENSMUST00000160371ENSMUST00000160549ENSMUST00000161143ENSMUSG00000048644ENSMUST00000053252ENSMUSG00000087876ENSMUST00000157251
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000087613 ENSDART00000124457 N/A N/A N/A 0.156±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000097444 ENSDART00000153837 N/A N/A N/A 6.089±1.61 N/A N/A 0.070±0.00 0.590±0.51 N/A N/A 0.533±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104980 ENST00000270538 N/A N/A N/A 2.299±0.00 3.434±1.09 0.890±0.00 1.832±0.00 N/A 1.440±0.21 N/A N/A 6.726±3.32 5.477±1.36 6.301±0.00
ENST00000595565 N/A N/A N/A N/A N/A N/A N/A 10.209±0.00 N/A N/A N/A N/A N/A N/A
ENST00000595831 11.259±0.00 10.086±0.00 N/A 7.329±0.00 12.250±0.00 16.429±0.00 11.753±0.00 5.807±4.11 6.897±0.00 5.380±0.00 16.925±0.00 12.818±12.02 7.000±2.48 13.399±0.00
ENST00000595876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597926 7.242±0.00 6.913±0.00 2.541±0.00 N/A N/A 1.733±0.00 13.759±0.00 6.740±4.20 3.807±0.00 0.891±0.00 9.947±4.45 1.888±0.00 8.454±0.00 8.704±0.00
ENST00000598481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.033±0.00 N/A
ENST00000598968 N/A 10.641±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.369±0.00 N/A N/A N/A
ENST00000599650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599939 N/A N/A 0.521±0.00 N/A 0.899±0.00 N/A N/A N/A N/A N/A N/A 3.103±0.00 N/A N/A
ENST00000600000 N/A N/A N/A N/A 1.695±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600748 N/A N/A N/A N/A N/A 1.559±0.00 2.648±0.00 N/A 1.946±0.00 1.455±0.00 N/A 3.495±0.00 N/A N/A
ENSG00000178531 ENST00000318978 N/A N/A N/A 34.988±27.40 N/A 39.176±0.00 N/A 14.119±0.00 N/A 21.255±0.00 N/A 38.602±0.00 N/A 32.742±5.68
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002949 ENSMUST00000003029 12.704±2.94 18.361±2.53 12.749±1.82 10.527±2.36 13.769±3.43 17.051±2.60 30.812±2.62 24.278±3.19 21.250±4.24 6.260±1.59 21.960±1.07 18.194±2.33 18.220±6.37 14.245±2.93
ENSMUST00000135755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141195 10.419±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148672 N/A N/A N/A N/A N/A N/A N/A 19.408±0.75 11.308±0.00 N/A N/A 29.875±5.30 N/A N/A
ENSMUST00000149827 9.021±3.46 8.171±4.18 9.515±0.66 7.680±2.37 9.277±0.15 N/A 5.416±0.05 N/A 4.055±0.61 8.283±0.00 4.331±0.45 7.779±2.87 3.893±0.46 3.440±0.69
ENSMUST00000160371 N/A N/A N/A 11.937±0.00 13.939±0.51 4.927±0.00 N/A 5.927±0.00 N/A 4.491±0.00 N/A 8.885±1.19 11.022±2.01 7.011±0.00
ENSMUST00000160549 N/A N/A N/A 16.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161143 N/A N/A N/A 15.999±0.00 N/A N/A N/A N/A N/A N/A N/A 31.680±0.00 27.415±7.59 85.934±0.00
ENSMUSG00000048644 ENSMUST00000053252 29.558±26.17 7.183±1.88 56.424±4.75 124.817±44.14 3.271±1.47 13.371±1.89 1.910±0.38 2.569±0.40 1.999±1.54 15.228±2.39 0.375±0.16 56.320±29.33 5.109±4.04 26.421±13.29
ENSMUSG00000087876 ENSMUST00000157251 N/A N/A 0.177±0.05 0.553±0.24 N/A N/A 0.264±0.00 N/A 0.104±0.05 N/A 0.435±0.00 0.682±0.00 0.396±0.11 0.872±0.00

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