C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translocase of inner mitochondrial membrane 44 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000270538 TIMM44-001 ENSG00000104980 9606 - 19:7926740-7943920 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverOvaryPlacentaTestisENST00000270538
Transcript ID Brain Breast Colon Heart Liver Ovary Placenta Testis
ENST00000270538 2.299±0.00 3.434±1.09 0.890±0.00 1.832±0.00 1.440±0.21 6.726±3.32 5.477±1.36 6.301±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GX CIL_0005GX_0002 CGP 19:7924485-7943920
CIL_0002NQ CIL_0002NQ_0001 CGP 19:7926718-8445041

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005759 IDA mitochondrial matrix
GO:0006626 TAS protein targeting to mitochondrion
GO:0006886 IEA intracellular protein transport
GO:0015450 IEA P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GO:0044267 TAS cellular protein metabolic process
GO:0071806 IEA protein transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003029 Timm44-001 protein_coding Mus_musculus 0 1386
ENSMUST00000160371 Timm44-007 nonsense_mediated_decay Mus_musculus 0 1332
ENSMUST00000149827 Timm44-002 retained_intron Mus_musculus 0 918
ENSMUST00000141195 Timm44-003 retained_intron Mus_musculus 0 640
ENSMUST00000135755 Timm44-004 retained_intron Mus_musculus 0 296
ENSMUST00000148672 Timm44-005 retained_intron Mus_musculus 0 279
ENSMUST00000161143 Timm44-009 processed_transcript Mus_musculus 0 625
ENSMUST00000160549 Timm44-008 retained_intron Mus_musculus 0 617

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