C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005L3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045166-ENSDARG00000062515 CGP 7955 12:18822354-18865039
GeneTranscriptPositionBiotype
ENSDARG00000045166 (bhlha15)
basic helix-loop-helix family, member a15 		ENSDART00000112119 (bhlha15-201) 18822354-18824381 protein_coding
ENSDARG00000062515 (tecpr1a)
tectonin beta-propeller repeat containing 1a 		ENSDART00000090484 (tecpr1a-201) 18829497-18865039 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005L3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180535-ENSG00000205356 CGP 9606 7:98211427-98252251
GeneTranscriptPositionBiotype
ENSG00000180535 (BHLHA15)
basic helix-loop-helix family, member a15 		ENST00000314018 (BHLHA15-001) 98212254-98212959 protein_coding
ENST00000609256 (BHLHA15-003) 98211427-98212979 protein_coding
ENSG00000205356 (TECPR1)
tectonin beta-propeller repeat containing 1 		ENST00000415086 (TECPR1-012) 98245035-98252206 protein_coding
ENST00000420697 (TECPR1-011) 98245043-98252117 protein_coding
ENST00000423128 (TECPR1-007) 98244990-98251927 protein_coding
ENST00000447648 (TECPR1-001) 98214624-98252251 protein_coding
ENST00000462511 (TECPR1-018) 98217743-98222974 processed_transcript
ENST00000463402 (TECPR1-004) 98216737-98222961 retained_intron
ENST00000463648 (TECPR1-014) 98238504-98243574 retained_intron
ENST00000471397 (TECPR1-008) 98233427-98246123 processed_transcript
ENST00000472845 (TECPR1-002) 98243571-98252218 processed_transcript
ENST00000474915 (TECPR1-017) 98217967-98223743 retained_intron
ENST00000476659 (TECPR1-015) 98223031-98228861 processed_transcript
ENST00000479911 (TECPR1-013) 98226592-98231118 processed_transcript
ENST00000479975 (TECPR1-016) 98222385-98228684 processed_transcript
ENST00000483740 (TECPR1-009) 98229044-98231626 retained_intron
ENST00000485716 (TECPR1-010) 98216760-98217838 retained_intron
ENST00000488667 (TECPR1-005) 98250914-98252175 retained_intron
ENST00000490842 (TECPR1-003) 98215516-98233842 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0005L3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052271-ENSMUSG00000066621 CGP 10090 5:144190286-144223615
GeneTranscriptPositionBiotype
ENSMUSG00000052271 (Bhlha15)
basic helix-loop-helix family, member a15 		ENSMUST00000060747 (Bhlha15-001) 144190286-144194441 protein_coding
ENSMUSG00000066621 (Tecpr1)
tectonin beta-propeller repeat containing 1 		ENSMUST00000085701 (Tecpr1-001) 144194442-144223615 protein_coding
ENSMUST00000125672 (Tecpr1-011) 144196127-144198195 retained_intron
ENSMUST00000130962 (Tecpr1-006) 144207483-144208639 nonsense_mediated_decay
ENSMUST00000136018 (Tecpr1-007) 144218320-144223558 retained_intron
ENSMUST00000137149 (Tecpr1-003) 144209475-144223552 retained_intron
ENSMUST00000140524 (Tecpr1-010) 144196132-144199011 retained_intron
ENSMUST00000147992 (Tecpr1-008) 144200488-144203580 retained_intron
ENSMUST00000151479 (Tecpr1-009) 144198584-144199786 retained_intron
ENSMUST00000153103 (Tecpr1-004) 144195351-144223547 retained_intron
ENSMUST00000153751 (Tecpr1-005) 144209458-144215659 retained_intron
ENSMUST00000156129 (Tecpr1-002) 144212188-144223606 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005L3_0001ENSDARG00000045166ENSDART00000112119ENSDARG00000062515ENSDART00000090484CIL_0005L3_0002ENSG00000180535ENST00000314018ENST00000609256ENSG00000205356ENST00000415086ENST00000420697ENST00000423128ENST00000447648ENST00000462511ENST00000463402ENST00000463648ENST00000471397ENST00000472845ENST00000474915ENST00000476659ENST00000479911ENST00000479975ENST00000483740ENST00000485716ENST00000488667ENST00000490842CIL_0005L3_0003ENSMUSG00000052271ENSMUST00000060747ENSMUSG00000066621ENSMUST00000085701ENSMUST00000125672ENSMUST00000130962ENSMUST00000136018ENSMUST00000137149ENSMUST00000140524ENSMUST00000147992ENSMUST00000151479ENSMUST00000153103ENSMUST00000153751ENSMUST00000156129
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005L3_0001ENSDARG00000045166ENSDART00000112119ENSDARG00000062515ENSDART00000090484CIL_0005L3_0002ENSG00000180535ENST00000314018ENST00000609256ENSG00000205356ENST00000415086ENST00000447648ENST00000463648ENST00000471397ENST00000472845ENST00000485716ENST00000490842CIL_0005L3_0003ENSMUSG00000052271ENSMUST00000060747ENSMUSG00000066621ENSMUST00000085701ENSMUST00000153103
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045166 ENSDART00000112119 N/A N/A N/A 0.436±0.13 N/A N/A 0.056±0.00 0.804±0.00 0.572±0.00 N/A 0.110±0.00 N/A N/A N/A
ENSDARG00000062515 ENSDART00000090484 N/A N/A N/A 3.017±3.96 N/A N/A 0.869±0.40 0.416±0.00 0.180±0.00 N/A 1.804±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000180535 ENST00000314018 N/A 1.128±0.00 N/A 0.495±0.23 0.665±0.00 0.338±0.00 0.069±0.00 1.272±0.01 N/A 0.458±0.35 0.431±0.00 0.576±0.00 0.236±0.13 0.065±0.00
ENST00000609256 N/A N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A 0.676±0.00 N/A 0.223±0.00 N/A N/A
ENSG00000205356 ENST00000415086 N/A N/A 2.087±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447648 2.666±0.00 7.186±0.00 N/A 1.824±0.99 0.586±0.33 1.153±0.00 0.775±0.69 1.929±0.00 0.275±0.00 3.716±0.00 2.051±0.00 1.748±1.19 6.519±0.56 1.890±0.06
ENST00000462511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.479±0.00 N/A N/A N/A
ENST00000471397 N/A N/A N/A N/A N/A N/A N/A N/A 0.767±0.00 N/A N/A N/A N/A N/A
ENST00000472845 N/A N/A N/A N/A N/A N/A N/A 1.804±0.00 1.309±0.00 N/A N/A N/A N/A 3.510±0.00
ENST00000474915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485716 N/A N/A N/A N/A N/A N/A N/A N/A 0.953±0.00 N/A N/A N/A N/A N/A
ENST00000488667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490842 1.481±0.00 3.442±0.00 N/A N/A 1.220±0.83 0.807±0.00 0.681±0.00 N/A N/A N/A N/A N/A N/A 1.304±0.56
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052271 ENSMUST00000060747 0.085±0.07 0.418±0.07 0.202±0.03 0.042±0.02 0.294±0.07 2.769±0.89 0.045±0.02 0.079±0.02 0.355±0.20 0.673±0.05 0.033±0.01 0.660±0.28 6.407±4.38 0.065±0.03
ENSMUSG00000066621 ENSMUST00000085701 22.150±8.05 57.827±3.72 10.656±0.58 20.192±6.41 26.692±12.12 15.857±2.79 9.393±1.11 11.912±1.66 2.263±0.82 37.633±6.81 6.734±0.26 16.810±4.66 5.954±1.50 5.607±1.03
ENSMUST00000125672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153103 N/A N/A N/A N/A N/A N/A N/A N/A 0.619±0.18 N/A N/A 2.528±0.00 N/A N/A
ENSMUST00000153751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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