C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005MC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000118242-ENSG00000115425 CGP 9606 2:215942805-216082955
GeneTranscriptPositionBiotype
ENSG00000115425 (PECR)
peroxisomal trans-2-enoyl-CoA reductase 		ENST00000265322 (PECR-001) 216038409-216081816 protein_coding
ENST00000442122 (PECR-005) 215996329-216081790 nonsense_mediated_decay
ENST00000461330 (PECR-003) 216039256-216066523 retained_intron
ENST00000464722 (PECR-008) 216065450-216082955 processed_transcript
ENST00000464737 (PECR-002) 216043972-216057947 processed_transcript
ENST00000474093 (PECR-004) 216065210-216081800 retained_intron
ENST00000487318 (PECR-006) 216063889-216081801 processed_transcript
ENST00000497889 (PECR-007) 216049263-216081745 processed_transcript
ENSG00000118242 (MREG)
melanoregulin 		ENST00000263268 (MREG-001) 215944490-216013623 protein_coding
ENST00000420348 (MREG-002) 215945573-216032959 protein_coding
ENST00000424992 (MREG-004) 215944988-216034096 protein_coding
ENST00000439791 (MREG-003) 215944959-216033804 protein_coding
ENST00000620139 (MREG-201) 215942805-216013613 protein_coding
ENSG00000163449 (TMEM169)
transmembrane protein 169 		ENST00000295658 (TMEM169-001) 216081895-216102783 protein_coding
ENST00000406027 (TMEM169-004) 216081919-216102382 protein_coding
ENST00000433112 (TMEM169-002) 216081866-216099998 protein_coding
ENST00000437356 (TMEM169-003) 216081889-216101065 protein_coding
ENST00000454545 (TMEM169-201) 216081866-216102782 protein_coding
ENST00000455479 (TMEM169-005) 216081919-216099953 protein_coding
CIL_0005MC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039395-ENSMUSG00000026189 CGP 10090 1:72159442-72284314
GeneTranscriptPositionBiotype
ENSMUSG00000026189 (Pecr)
peroxisomal trans-2-enoyl-CoA reductase 		ENSMUST00000027381 (Pecr-001) 72259172-72284314 protein_coding
ENSMUST00000097698 (Pecr-003) 72266996-72284259 protein_coding
ENSMUST00000129458 (Pecr-004) 72259172-72284313 nonsense_mediated_decay
ENSMUST00000134840 (Pecr-002) 72259167-72284259 nonsense_mediated_decay
ENSMUSG00000039395 (Mreg)
melanoregulin 		ENSMUST00000048860 (Mreg-001) 72159442-72212307 protein_coding
ENSMUSG00000093843 (Gm25939)
predicted gene, 25939 		ENSMUST00000179876 (Gm25939-201) 72255008-72255198 snRNA
ENSMUSG00000093956 (Gm24497)
predicted gene, 24497 		ENSMUST00000177868 (Gm24497-201) 72244213-72244403 snRNA
ENSMUSG00000094050 (Gm23472)
predicted gene, 23472 		ENSMUST00000101806 (Gm23472-201) 72236946-72237136 snRNA
ENSMUSG00000094655 (Gm25360)
predicted gene, 25360 		ENSMUST00000178786 (Gm25360-201) 72226240-72226430 snRNA
ENSMUSG00000097131 (D230017M19Rik)
RIKEN cDNA D230017M19 gene 		ENSMUST00000180722 (D230017M19Rik-201) 72244021-72274869 lincRNA
ENSMUST00000181382 (D230017M19Rik-202) 72264693-72267178 lincRNA
ENSMUST00000181973 (D230017M19Rik-203) 72236465-72266136 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005MC_0001ENSG00000115425ENST00000265322ENST00000442122ENST00000461330ENST00000464722ENST00000464737ENST00000474093ENST00000487318ENST00000497889ENSG00000118242ENST00000263268ENST00000420348ENST00000424992ENST00000439791ENST00000620139ENSG00000163449ENST00000295658ENST00000406027ENST00000433112ENST00000437356ENST00000454545ENST00000455479CIL_0005MC_0002ENSMUSG00000026189ENSMUST00000027381ENSMUST00000097698ENSMUST00000129458ENSMUST00000134840ENSMUSG00000039395ENSMUST00000048860ENSMUSG00000093843ENSMUST00000179876ENSMUSG00000093956ENSMUST00000177868ENSMUSG00000094050ENSMUST00000101806ENSMUSG00000094655ENSMUST00000178786ENSMUSG00000097131ENSMUST00000180722ENSMUST00000181382ENSMUST00000181973
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005MC_0001ENSG00000115425ENST00000265322ENST00000442122ENST00000461330ENST00000474093ENSG00000118242ENST00000263268ENST00000424992ENST00000439791ENST00000620139ENSG00000163449ENST00000295658ENST00000406027ENST00000433112ENST00000437356ENST00000454545ENST00000455479CIL_0005MC_0002ENSMUSG00000026189ENSMUST00000027381ENSMUST00000097698ENSMUST00000129458ENSMUSG00000039395ENSMUST00000048860ENSMUSG00000093843ENSMUST00000179876ENSMUSG00000093956ENSMUST00000177868ENSMUSG00000094050ENSMUST00000101806ENSMUSG00000094655ENSMUST00000178786ENSMUSG00000097131ENSMUST00000180722ENSMUST00000181382ENSMUST00000181973
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115425 ENST00000265322 7.307±0.00 0.426±0.00 0.822±0.00 0.969±0.00 9.036±0.00 1.989±0.00 0.170±0.00 11.151±4.98 4.960±4.26 1.092±0.05 0.520±0.00 1.543±0.13 N/A 1.039±0.00
ENST00000442122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.232±0.00 N/A N/A N/A
ENST00000461330 4.337±0.00 N/A N/A 2.632±0.00 10.210±0.00 2.700±0.35 0.864±0.12 N/A 7.691±5.85 N/A 1.808±0.00 2.188±0.00 N/A N/A
ENST00000464722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474093 N/A N/A N/A N/A N/A 5.564±0.00 N/A 25.974±0.00 N/A N/A 1.031±0.00 1.473±0.00 N/A N/A
ENST00000487318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000118242 ENST00000263268 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.505±0.13 N/A 0.647±0.00 3.025±0.72 0.310±0.00
ENST00000420348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424992 N/A N/A N/A 4.122±0.00 2.239±0.00 N/A N/A N/A N/A 7.764±0.00 N/A N/A N/A N/A
ENST00000439791 N/A N/A N/A N/A N/A 2.445±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620139 1.019±0.00 N/A N/A 1.387±0.00 1.894±0.00 0.470±0.00 N/A N/A 0.239±0.00 2.492±0.00 0.085±0.00 1.390±1.08 2.511±0.78 0.403±0.02
ENSG00000163449 ENST00000295658 0.141±0.00 0.202±0.00 N/A 0.641±0.05 0.311±0.13 0.122±0.09 0.106±0.00 0.271±0.00 0.107±0.04 0.109±0.00 N/A 0.143±0.06 0.061±0.00 0.108±0.00
ENST00000406027 N/A 0.064±0.00 0.116±0.00 0.267±0.00 N/A N/A 0.008±0.00 N/A N/A 0.066±0.00 0.004±0.00 0.040±0.03 N/A 0.049±0.00
ENST00000433112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A
ENST00000437356 0.155±0.00 N/A 0.450±0.00 0.738±0.19 N/A 0.150±0.00 N/A N/A N/A 0.755±0.00 N/A N/A N/A N/A
ENST00000454545 N/A N/A N/A 0.312±0.00 N/A N/A N/A 0.772±0.00 N/A N/A N/A N/A N/A 0.193±0.00
ENST00000455479 N/A N/A 0.325±0.00 N/A 0.374±0.00 0.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026189 ENSMUST00000027381 9.847±1.70 6.051±0.78 7.943±2.22 0.218±0.00 5.871±1.96 2.821±0.73 5.221±1.01 114.588±14.76 90.160±64.46 2.405±0.48 10.347±0.66 8.579±3.65 19.623±16.09 0.819±0.38
ENSMUST00000097698 N/A N/A N/A 0.371±0.00 N/A N/A N/A N/A N/A N/A N/A 2.011±0.00 N/A N/A
ENSMUST00000129458 N/A N/A N/A 1.081±0.00 4.871±0.00 N/A N/A N/A N/A N/A N/A 4.873±0.00 2.866±0.57 1.296±0.00
ENSMUST00000134840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039395 ENSMUST00000048860 0.496±0.13 0.478±0.30 9.066±1.44 0.852±0.81 4.843±1.13 1.011±0.18 7.932±1.19 1.839±0.28 17.124±15.61 2.485±1.36 12.723±1.96 2.831±1.44 7.641±2.19 4.848±0.55
ENSMUSG00000093843 ENSMUST00000179876 N/A N/A 1.282±0.00 N/A 11.219±0.00 N/A 2.354±0.04 5.956±2.43 1.822±1.02 19.076±0.00 1.460±0.67 22.577±18.47 1126.448±1886.82 2.875±0.04
ENSMUSG00000093956 ENSMUST00000177868 N/A N/A N/A N/A N/A N/A 4.628±0.00 3.525±0.00 5.475±0.00 N/A N/A 14.772±13.69 1.514±0.00 N/A
ENSMUSG00000094050 ENSMUST00000101806 N/A N/A N/A N/A N/A N/A N/A N/A 5.938±0.63 N/A N/A N/A N/A N/A
ENSMUSG00000094655 ENSMUST00000178786 N/A 2.807±0.05 N/A 2.910±0.00 11.192±0.00 5.234±0.00 2.314±0.00 2.013±0.03 5.697±3.19 4.862±0.11 1.117±0.00 15.681±1.06 101.319±167.03 11.331±0.00
ENSMUSG00000097131 ENSMUST00000180722 0.748±0.01 N/A N/A 0.118±0.00 0.711±0.39 N/A 0.322±0.06 N/A N/A 0.291±0.06 0.492±0.00 0.735±0.15 N/A 0.187±0.09
ENSMUST00000181382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.577±0.00 0.374±0.00 N/A
ENSMUST00000181973 1.784±0.00 2.082±0.60 1.941±0.00 3.587±0.00 1.035±0.04 0.951±0.31 0.570±0.00 N/A N/A 0.683±0.09 N/A 2.202±0.31 0.389±0.00 0.249±0.00

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