C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005OU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111885-ENSG00000146350 CGP 9606 6:119177209-121334745
GeneTranscriptPositionBiotype
ENSG00000111885 (MAN1A1)
mannosidase, alpha, class 1A, member 1 		ENST00000368468 (MAN1A1-001) 119177209-119349761 protein_coding
ENSG00000146350 (TBC1D32)
TBC1 domain family, member 32 		ENST00000275159 (TBC1D32-003) 121080237-121334430 protein_coding
ENST00000368464 (TBC1D32-009) 121095910-121115316 processed_transcript
ENST00000398197 (TBC1D32-006) 121079494-121237062 processed_transcript
ENST00000398212 (TBC1D32-005) 121080771-121334480 protein_coding
ENST00000422369 (TBC1D32-004) 121308025-121334745 protein_coding
ENST00000464622 (TBC1D32-002) 121080237-121334478 nonsense_mediated_decay
ENST00000509492 (TBC1D32-007) 121112386-121160037 nonsense_mediated_decay
ENST00000519972 (TBC1D32-010) 121080859-121106170 retained_intron
ENST00000523345 (TBC1D32-008) 121126455-121163062 processed_transcript
ENSG00000200732 (RNU6-194P)
RNA, U6 small nuclear 194, pseudogene 		ENST00000363862 (RNU6-194P-201) 119327281-119327385 snRNA
ENSG00000216316 (RP3-354N19.3)
 ENST00000406333 (RP3-354N19.3-001) 119269133-119269714 processed_pseudogene
CIL_0005OU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003746-ENSMUSG00000038122 CGP 10090 10:53904788-56228689
GeneTranscriptPositionBiotype
ENSMUSG00000003746 (Man1a)
mannosidase 1, alpha 		ENSMUST00000003843 (Man1a-001) 53904788-54075796 protein_coding
ENSMUST00000105469 (Man1a-004) 54005161-54075736 protein_coding
ENSMUST00000105470 (Man1a-002) 53907015-54075709 protein_coding
ENSMUST00000133330 (Man1a-003) 54013305-54075737 retained_intron
ENSMUST00000146483 (Man1a-005) 53975095-54075709 retained_intron
ENSMUSG00000038122 (Tbc1d32)
TBC1 domain family, member 32 		ENSMUST00000099739 (Tbc1d32-201) 56014298-56228689 protein_coding
ENSMUSG00000047669 (Msl3l2)
male-specific lethal 3-like 2 (Drosophila) 		ENSMUST00000063138 (Msl3l2-201) 56106917-56116880 protein_coding
ENSMUSG00000097069 (Gm16998)
predicted gene, 16998 		ENSMUST00000181899 (Gm16998-201) 54075922-54081081 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OU_0001ENSG00000111885ENST00000368468ENSG00000146350ENST00000275159ENST00000368464ENST00000398197ENST00000398212ENST00000422369ENST00000464622ENST00000509492ENST00000519972ENST00000523345ENSG00000200732ENST00000363862ENSG00000216316ENST00000406333CIL_0005OU_0002ENSMUSG00000003746ENSMUST00000003843ENSMUST00000105469ENSMUST00000105470ENSMUST00000133330ENSMUST00000146483ENSMUSG00000038122ENSMUST00000099739ENSMUSG00000047669ENSMUST00000063138ENSMUSG00000097069ENSMUST00000181899
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OU_0001ENSG00000111885ENST00000368468ENSG00000146350ENST00000275159ENST00000368464ENST00000398197ENST00000398212ENST00000422369ENST00000464622ENST00000509492ENSG00000200732ENST00000363862ENSG00000216316ENST00000406333CIL_0005OU_0002ENSMUSG00000003746ENSMUST00000003843ENSMUST00000105469ENSMUST00000105470ENSMUST00000133330ENSMUSG00000038122ENSMUST00000099739ENSMUSG00000047669ENSMUST00000063138ENSMUSG00000097069ENSMUST00000181899
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111885 ENST00000368468 27.345±0.00 16.351±0.00 7.808±0.00 3.581±1.00 24.573±7.89 18.114±3.98 5.021±1.82 29.250±3.91 31.043±8.77 16.887±1.61 2.643±1.63 8.745±2.23 18.056±6.41 6.313±4.31
ENSG00000146350 ENST00000275159 N/A N/A N/A 1.380±0.00 N/A N/A 0.228±0.00 N/A 0.340±0.32 0.151±0.00 N/A 0.229±0.07 0.334±0.00 2.238±0.00
ENST00000368464 0.186±0.00 0.536±0.00 N/A N/A N/A N/A 0.245±0.00 N/A N/A N/A N/A 1.037±0.00 0.774±0.00 3.824±0.00
ENST00000398197 0.049±0.00 N/A N/A N/A N/A N/A 0.067±0.00 0.415±0.00 0.009±0.00 N/A N/A 0.148±0.00 N/A 2.806±0.00
ENST00000398212 N/A N/A N/A 1.256±0.00 1.076±0.00 N/A 0.037±0.00 N/A 0.017±0.00 0.666±0.00 N/A 0.760±0.00 N/A N/A
ENST00000422369 N/A N/A N/A N/A N/A N/A 0.203±0.00 0.175±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464622 0.039±0.00 0.214±0.00 N/A 0.130±0.00 N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A 0.664±0.00
ENST00000509492 N/A N/A N/A N/A 2.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200732 ENST00000363862 N/A N/A N/A N/A 0.489±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000216316 ENST00000406333 0.359±0.00 0.032±0.00 0.121±0.00 0.762±0.00 1.753±1.42 1.106±0.62 0.596±0.51 0.799±0.54 0.690±0.66 0.530±0.40 N/A 0.222±0.23 0.065±0.00 0.087±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003746 ENSMUST00000003843 16.222±1.99 15.380±5.21 19.295±4.44 2.253±0.58 24.244±5.58 11.193±1.89 4.112±0.80 13.494±3.77 25.210±12.43 10.407±0.87 1.528±0.34 9.646±2.73 11.201±4.67 0.181±0.09
ENSMUST00000105469 N/A 37.871±9.45 N/A N/A 14.035±1.57 8.115±2.55 N/A N/A N/A N/A N/A 4.770±1.24 N/A N/A
ENSMUST00000105470 N/A N/A N/A 4.464±0.00 N/A N/A N/A 9.481±1.58 3.967±0.33 N/A N/A 7.037±0.00 19.195±7.11 0.078±0.03
ENSMUST00000133330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.874±0.66 N/A 0.073±0.00
ENSMUST00000146483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038122 ENSMUST00000099739 1.186±0.31 0.780±0.18 1.169±0.21 0.728±0.04 0.897±0.12 0.752±0.23 0.624±0.09 1.486±0.09 0.465±0.23 1.162±0.31 0.323±0.04 1.318±0.41 0.475±0.16 1.106±0.56
ENSMUSG00000047669 ENSMUST00000063138 3.441±1.16 5.247±1.01 3.901±0.33 4.652±1.01 2.817±1.17 1.808±0.20 0.557±0.03 0.741±0.05 0.648±0.21 9.632±0.63 0.173±0.07 7.756±3.21 0.935±0.29 25.334±11.71
ENSMUSG00000097069 ENSMUST00000181899 0.102±0.06 0.128±0.06 0.229±0.00 0.134±0.10 0.204±0.11 0.134±0.01 0.062±0.03 0.126±0.05 0.207±0.12 0.099±0.03 0.042±0.00 0.225±0.06 0.162±0.12 0.062±0.02

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