C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 32
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099739 Tbc1d32-201 ENSMUSG00000038122 10090 - 10:56014298-56228689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099739
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099739 1.186±0.31 0.780±0.18 1.169±0.21 0.728±0.04 0.897±0.12 0.752±0.23 0.624±0.09 1.486±0.09 0.465±0.23 1.162±0.31 0.323±0.04 1.318±0.41 0.475±0.16 1.106±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OU CIL_0005OU_0002 CGP 10:53904788-56228689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002088 IMP lens development in camera-type eye
GO:0003406 IMP retinal pigment epithelium development
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005929 IEA cilium
GO:0007224 IMP smoothened signaling pathway
GO:0021915 IMP neural tube development
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0035082 ISO axoneme assembly
GO:0042733 IMP embryonic digit morphogenesis
GO:0043010 IMP camera-type eye development
GO:0060041 IMP retina development in camera-type eye
GO:0060271 IMP cilium morphogenesis
GO:0060831 IGI smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061512 IMP protein localization to cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275159 TBC1D32-003 protein_coding Homo_sapiens 0 3818
ENST00000368464 TBC1D32-009 processed_transcript Homo_sapiens 0 486
ENST00000398197 TBC1D32-006 processed_transcript Homo_sapiens 0 1245
ENST00000398212 TBC1D32-005 protein_coding Homo_sapiens 0 2455
ENST00000422369 TBC1D32-004 protein_coding Homo_sapiens 0 616
ENST00000464622 TBC1D32-002 nonsense_mediated_decay Homo_sapiens 0 2235
ENST00000509492 TBC1D32-007 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000519972 TBC1D32-010 retained_intron Homo_sapiens 0 409

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