C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005OX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000061492-ENSG00000112981 CGP 9606 5:138083892-138139443
GeneTranscriptPositionBiotype
ENSG00000112981 (NME5)
NME/NM23 family member 5 		ENST00000265191 (NME5-001) 138115172-138139415 protein_coding
ENST00000506657 (NME5-005) 138115407-138128643 retained_intron
ENST00000508252 (NME5-004) 138127433-138129435 processed_transcript
ENST00000511353 (NME5-003) 138129421-138139167 retained_intron
ENST00000512954 (NME5-002) 138138341-138139443 retained_intron
ENST00000514481 (NME5-006) 138115553-138116381 processed_transcript
ENSG00000199880 (RNU6-888P)
RNA, U6 small nuclear 888, pseudogene 		ENST00000363010 (RNU6-888P-201) 138123011-138123111 snRNA
CIL_0005OX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000012282-ENSMUSG00000035984 CGP 10090 18:34542313-34579115
GeneTranscriptPositionBiotype
ENSMUSG00000012282 (Wnt8a)
wingless-type MMTV integration site family, member 8A 		ENSMUST00000012426 (Wnt8a-201) 34542313-34548273 protein_coding
ENSMUSG00000035984 (Nme5)
NME/NM23 family member 5 		ENSMUST00000079287 (Nme5-001) 34562636-34579115 protein_coding
ENSMUST00000134875 (Nme5-002) 34562634-34579100 nonsense_mediated_decay
ENSMUST00000154342 (Nme5-004) 34567038-34579083 nonsense_mediated_decay
ENSMUST00000155114 (Nme5-003) 34562684-34579087 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OX_0001ENSG00000112981ENST00000265191ENST00000506657ENST00000508252ENST00000511353ENST00000512954ENST00000514481ENSG00000199880ENST00000363010CIL_0005OX_0002ENSMUSG00000012282ENSMUST00000012426ENSMUSG00000035984ENSMUST00000079287ENSMUST00000134875ENSMUST00000154342ENSMUST00000155114
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OX_0001ENSG00000112981ENST00000265191ENST00000506657ENST00000508252ENST00000511353ENST00000512954ENST00000514481ENSG00000199880ENST00000363010CIL_0005OX_0002ENSMUSG00000012282ENSMUST00000012426ENSMUSG00000035984ENSMUST00000079287ENSMUST00000134875ENSMUST00000154342ENSMUST00000155114
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112981 ENST00000265191 N/A 0.214±0.00 1.380±0.00 4.982±0.91 0.236±0.18 N/A 0.809±0.16 5.820±0.00 0.425±0.00 1.272±1.00 N/A 1.846±1.47 0.079±0.02 5.518±1.42
ENST00000506657 N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A
ENST00000508252 N/A N/A N/A N/A 0.048±0.00 0.089±0.00 N/A N/A 0.108±0.00 1.199±0.00 N/A N/A 0.037±0.00 N/A
ENST00000511353 0.087±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.00 0.052±0.00 N/A
ENST00000512954 N/A N/A 1.177±0.00 N/A N/A N/A N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A
ENST00000514481 N/A N/A N/A N/A N/A 0.547±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199880 ENST00000363010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.855±0.34
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000012282 ENSMUST00000012426 N/A N/A 0.005±0.00 0.019±0.01 0.038±0.02 N/A N/A N/A N/A 0.037±0.01 N/A 0.121±0.07 0.558±0.57 0.052±0.03
ENSMUSG00000035984 ENSMUST00000079287 0.204±0.09 0.282±0.08 1.241±0.00 3.763±2.88 0.293±0.19 0.394±0.21 0.732±0.14 1.554±0.32 0.096±0.03 4.623±1.26 0.647±0.18 4.929±3.32 0.337±0.17 61.763±19.24
ENSMUST00000134875 0.190±0.00 N/A N/A N/A N/A 0.376±0.00 N/A N/A 0.034±0.02 N/A N/A N/A N/A N/A
ENSMUST00000154342 0.392±0.19 0.234±0.07 N/A 1.239±0.53 0.226±0.07 0.140±0.00 0.178±0.09 N/A 0.021±0.00 2.065±0.51 0.262±0.04 2.139±0.57 0.134±0.00 32.422±12.92
ENSMUST00000155114 0.240±0.00 N/A 0.794±0.29 N/A 0.058±0.00 0.658±0.00 0.581±0.00 N/A 0.080±0.04 N/A 0.773±0.25 4.933±1.19 0.922±0.55 N/A

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