C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 8A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000012426 Wnt8a-201 ENSMUSG00000012282 10090 + 18:34542313-34548273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLungOvaryPlacentaTestisENSMUST00000012426
Transcript ID Bladder Brain Breast Lung Ovary Placenta Testis
ENSMUST00000012426 0.005±0.00 0.019±0.01 0.038±0.02 0.037±0.01 0.121±0.07 0.558±0.57 0.052±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OW CIL_0005OW_0002 CGP 18:34442352-34548273
CIL_0005OX CIL_0005OX_0002 CGP 18:34542313-34579115

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IMP cell morphogenesis
GO:0003002 IMP regionalization
GO:0005109 IBA frizzled binding
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0007492 IMP endoderm development
GO:0009949 IMP polarity specification of anterior/posterior axis
GO:0010085 IMP polarity specification of proximal/distal axis
GO:0016055 IBA Wnt signaling pathway
GO:0030182 IBA neuron differentiation
GO:0032880 IMP regulation of protein localization
GO:0045165 IBA cell fate commitment
GO:0048561 IMP establishment of organ orientation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361560 WNT8A-001 nonsense_mediated_decay Homo_sapiens 0 1007
ENST00000398754 WNT8A-002 protein_coding Homo_sapiens 0 1002
ENST00000504809 WNT8A-003 protein_coding Homo_sapiens 0 952
ENST00000506684 WNT8A-004 protein_coding Homo_sapiens 0 976

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