C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005SQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010434-ENSDARG00000008060 CGP 7955 20:39285184-39325439
GeneTranscriptPositionBiotype
ENSDARG00000008060 (scara3)
scavenger receptor class A, member 3 		ENSDART00000002481 (scara3-201) 39308816-39325439 protein_coding
ENSDART00000146683 (scara3-001) 39308558-39325439 protein_coding
ENSDARG00000010434 (clu)
clusterin 		ENSDART00000101138 (clu-201) 39285318-39296553 protein_coding
ENSDART00000127173 (clu-001) 39285317-39298696 protein_coding
ENSDART00000141193 (clu-002) 39285184-39290162 protein_coding
ENSDART00000153114 (clu-003) 39292075-39298214 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005SQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120885-ENSG00000168077 CGP 9606 8:27596917-27676776
GeneTranscriptPositionBiotype
ENSG00000168077 (SCARA3)
scavenger receptor class A, member 3 		ENST00000301904 (SCARA3-001) 27634181-27673020 protein_coding
ENST00000337221 (SCARA3-002) 27633868-27676776 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SQ_0001ENSDARG00000008060ENSDART00000002481ENSDART00000146683ENSDARG00000010434ENSDART00000101138ENSDART00000127173ENSDART00000141193ENSDART00000153114CIL_0005SQ_0002ENSG00000168077ENST00000301904ENST00000337221
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SQ_0001ENSDARG00000008060ENSDART00000002481ENSDART00000146683ENSDARG00000010434ENSDART00000101138ENSDART00000127173ENSDART00000141193ENSDART00000153114CIL_0005SQ_0002ENSG00000168077ENST00000301904ENST00000337221
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008060 ENSDART00000002481 N/A N/A N/A 0.815±0.25 N/A N/A 4.096±2.55 5.910±3.19 N/A N/A 1.470±0.00 N/A N/A N/A
ENSDART00000146683 N/A N/A N/A 0.346±0.13 N/A N/A 0.971±0.57 1.004±0.33 N/A N/A 0.401±0.00 N/A N/A N/A
ENSDARG00000010434 ENSDART00000101138 N/A N/A N/A 43.053±9.64 N/A N/A 17.980±3.93 36.157±23.02 N/A N/A 10.672±0.00 N/A N/A N/A
ENSDART00000127173 N/A N/A N/A 98.700±13.18 N/A N/A 12.805±6.39 12.434±0.00 N/A N/A 6.008±0.00 N/A N/A N/A
ENSDART00000141193 N/A N/A N/A 226.492±13.65 N/A N/A 25.915±11.41 8.865±1.28 0.379±0.00 N/A N/A N/A N/A N/A
ENSDART00000153114 N/A N/A N/A 75.510±0.00 N/A N/A 15.525±0.00 N/A 0.054±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168077 ENST00000301904 6.374±0.00 15.239±0.00 0.925±0.00 10.965±6.97 4.483±3.23 5.417±4.64 1.264±0.73 2.394±2.18 2.258±1.83 7.392±5.98 0.545±0.42 9.240±10.22 25.626±4.63 5.893±4.11
ENST00000337221 N/A N/A 0.365±0.00 1.685±0.00 0.755±0.00 0.928±0.00 0.213±0.00 N/A 3.403±0.00 0.776±0.00 0.184±0.03 0.226±0.00 10.019±0.00 N/A

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