C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005UN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000241258-ENSG00000169902 CGP 9606 7:66114604-66420543
GeneTranscriptPositionBiotype
ENSG00000169902 (TPST1)
tyrosylprotein sulfotransferase 1 		ENST00000304842 (TPST1-001) 66205199-66360443 protein_coding
ENST00000442120 (TPST1-003) 66205317-66240550 protein_coding
ENST00000451388 (TPST1-004) 66221604-66240847 protein_coding
ENST00000480281 (TPST1-002) 66205334-66359473 processed_transcript
ENST00000490159 (TPST1-005) 66352504-66420543 processed_transcript
ENSG00000179406 (LINC00174)
long intergenic non-protein coding RNA 174 		ENST00000416366 (LINC00174-004) 66390131-66393729 lincRNA
ENST00000416572 (LINC00174-002) 66379827-66395919 lincRNA
ENST00000421767 (LINC00174-001) 66376044-66401338 lincRNA
ENST00000438894 (LINC00174-003) 66382419-66391542 lincRNA
ENSG00000222364 (RNU6-96P)
RNA, U6 small nuclear 96, pseudogene 		ENST00000410432 (RNU6-96P-201) 66395191-66395286 snRNA
ENSG00000230189 (GS1-124K5.2)
 ENST00000411606 (GS1-124K5.2-003) 66427949-66453634 transcribed_unprocessed_pseudogene
ENST00000429320 (GS1-124K5.2-002) 66476303-66490059 processed_transcript
ENST00000442578 (GS1-124K5.2-001) 66409143-66487990 processed_transcript
ENSG00000234185 (RP5-1132H15.1)
 ENST00000435524 (RP5-1132H15.1-001) 66119603-66165011 antisense
ENSG00000241258 (CRCP)
CGRP receptor component 		ENST00000338592 (CRCP-004) 66114850-66153289 protein_coding
ENST00000360415 (CRCP-002) 66114604-66154568 nonsense_mediated_decay
ENST00000395326 (CRCP-001) 66114605-66154561 protein_coding
ENST00000398684 (CRCP-005) 66114841-66152511 protein_coding
ENST00000431089 (CRCP-003) 66114826-66152870 protein_coding
ENST00000486848 (CRCP-007) 66114859-66134489 retained_intron
ENST00000492264 (CRCP-006) 66150663-66152652 processed_transcript
ENSG00000251451 (GS1-124K5.6)
 ENST00000502460 (GS1-124K5.6-001) 66407288-66409239 unprocessed_pseudogene
ENSG00000252126 (RNU6-313P)
RNA, U6 small nuclear 313, pseudogene 		ENST00000516317 (RNU6-313P-201) 66344303-66344414 snRNA
CIL_0005UN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025532-ENSMUSG00000034118 CGP 10090 5:130029290-130135729
GeneTranscriptPositionBiotype
ENSMUSG00000025532 (Crcp)
calcitonin gene-related peptide-receptor component protein 		ENSMUST00000026608 (Crcp-001) 130029290-130060789 protein_coding
ENSMUST00000156729 (Crcp-002) 130029343-130059932 processed_transcript
ENSMUSG00000034118 (Tpst1)
protein-tyrosine sulfotransferase 1 		ENSMUST00000040721 (Tpst1-001) 130079370-130135729 protein_coding
ENSMUST00000118993 (Tpst1-002) 130073326-130135729 protein_coding
ENSMUST00000128335 (Tpst1-004) 130133957-130135712 retained_intron
ENSMUST00000142838 (Tpst1-003) 130093589-130102050 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UN_0001ENSG00000169902ENST00000304842ENST00000442120ENST00000451388ENST00000480281ENST00000490159ENSG00000179406ENST00000416366ENST00000416572ENST00000421767ENST00000438894ENSG00000222364ENST00000410432ENSG00000230189ENST00000411606ENST00000429320ENST00000442578ENSG00000234185ENST00000435524ENSG00000241258ENST00000338592ENST00000360415ENST00000395326ENST00000398684ENST00000431089ENST00000486848ENST00000492264ENSG00000251451ENST00000502460ENSG00000252126ENST00000516317CIL_0005UN_0002ENSMUSG00000025532ENSMUST00000026608ENSMUST00000156729ENSMUSG00000034118ENSMUST00000040721ENSMUST00000118993ENSMUST00000128335ENSMUST00000142838
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UN_0001ENSG00000169902ENST00000304842ENST00000442120ENST00000451388ENST00000480281ENSG00000179406ENST00000416366ENST00000416572ENST00000421767ENSG00000222364ENST00000410432ENSG00000230189ENST00000411606ENST00000429320ENST00000442578ENSG00000234185ENST00000435524ENSG00000241258ENST00000338592ENST00000360415ENST00000395326ENST00000486848ENSG00000251451ENST00000502460ENSG00000252126ENST00000516317CIL_0005UN_0002ENSMUSG00000025532ENSMUST00000026608ENSMUST00000156729ENSMUSG00000034118ENSMUST00000040721ENSMUST00000118993
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169902 ENST00000304842 4.086±0.00 4.193±0.00 0.682±0.00 5.727±3.47 3.833±0.00 3.728±2.01 1.081±0.20 7.146±0.00 8.738±3.88 7.363±0.00 0.310±0.00 8.726±7.74 8.674±4.99 13.866±0.64
ENST00000442120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.433±0.00
ENST00000451388 N/A N/A 4.177±0.00 N/A N/A N/A N/A 2.527±0.00 8.774±0.00 N/A N/A 4.394±0.00 N/A N/A
ENST00000480281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.423±0.00 N/A N/A
ENST00000490159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179406 ENST00000416366 N/A N/A N/A N/A 2.315±0.00 N/A N/A N/A N/A N/A N/A N/A 1.852±0.00 N/A
ENST00000416572 N/A N/A N/A N/A N/A N/A N/A N/A 0.735±0.00 0.907±0.00 N/A 0.924±0.00 N/A 3.432±0.00
ENST00000421767 N/A 0.306±0.00 0.119±0.00 0.301±0.00 0.712±0.00 0.214±0.00 N/A 0.692±0.43 0.534±0.00 0.461±0.00 0.179±0.01 0.756±0.22 0.251±0.03 5.214±3.12
ENST00000438894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222364 ENST00000410432 N/A N/A N/A N/A 2.657±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.705±2.04
ENSG00000230189 ENST00000411606 0.145±0.00 N/A N/A 0.213±0.06 0.287±0.08 0.195±0.13 0.100±0.00 0.268±0.00 0.066±0.00 0.060±0.00 0.028±0.00 0.306±0.03 0.095±0.05 0.611±0.19
ENST00000429320 0.241±0.00 0.897±0.00 2.425±0.00 0.262±0.00 1.223±0.64 0.215±0.00 0.706±0.00 0.800±0.40 0.179±0.00 0.699±0.00 0.086±0.00 1.037±0.27 0.113±0.00 3.219±2.10
ENST00000442578 0.100±0.00 0.974±0.00 1.991±0.00 0.223±0.00 0.381±0.12 0.125±0.00 0.142±0.03 1.284±1.14 0.087±0.00 0.678±0.43 N/A 0.437±0.10 0.170±0.08 0.752±0.14
ENSG00000234185 ENST00000435524 0.031±0.00 0.127±0.00 N/A N/A N/A 0.116±0.00 0.028±0.00 0.062±0.00 N/A N/A N/A 0.092±0.00 N/A N/A
ENSG00000241258 ENST00000338592 6.719±0.00 N/A N/A 9.193±0.00 5.082±2.25 N/A N/A N/A N/A 1.909±0.00 N/A 6.050±1.81 N/A N/A
ENST00000360415 N/A N/A 1.054±0.00 1.816±0.00 N/A N/A N/A N/A 1.086±0.00 0.994±0.00 N/A 5.599±0.00 N/A 2.714±0.00
ENST00000395326 8.238±0.00 8.066±0.00 N/A 4.892±2.17 2.825±0.15 3.422±0.62 3.750±2.41 N/A 9.263±5.53 2.043±0.00 1.515±0.66 6.883±2.23 4.025±1.24 6.759±0.00
ENST00000398684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486848 N/A N/A N/A 8.884±0.00 N/A N/A 4.658±0.00 N/A 7.697±0.00 N/A 0.880±0.00 N/A N/A N/A
ENST00000492264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251451 ENST00000502460 N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A 0.244±0.00 N/A 0.199±0.00 N/A
ENSG00000252126 ENST00000516317 N/A N/A N/A 0.701±0.00 N/A N/A N/A N/A N/A N/A N/A 0.435±0.00 N/A 0.372±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025532 ENSMUST00000026608 7.428±0.41 9.009±1.37 10.983±0.44 12.754±1.86 5.966±2.68 5.169±1.16 4.111±0.77 8.939±0.89 10.867±3.78 6.363±0.22 8.537±0.56 10.182±1.87 17.047±2.28 24.573±4.49
ENSMUST00000156729 2.197±0.16 N/A N/A 19.378±0.00 1.211±0.10 N/A N/A N/A N/A 1.940±0.00 3.413±0.00 5.768±5.78 39.109±11.18 22.364±26.77
ENSMUSG00000034118 ENSMUST00000040721 23.688±4.70 44.775±4.38 35.528±1.70 7.273±4.26 13.581±5.60 8.231±0.80 4.786±0.49 4.301±0.27 7.522±2.25 15.924±1.78 2.800±0.53 20.217±6.27 4.905±2.33 25.240±11.87
ENSMUST00000118993 N/A N/A N/A 3.401±0.00 5.846±0.00 N/A N/A N/A 1.083±0.21 N/A N/A 9.827±7.82 3.877±2.55 0.974±0.00
ENSMUST00000128335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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