C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411606 GS1-124K5.2-003 ENSG00000230189 9606 - 7:66427949-66453634 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000411606
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000411606 0.145±0.00 0.213±0.06 0.287±0.08 0.195±0.13 0.100±0.00 0.268±0.00 0.066±0.00 0.060±0.00 0.028±0.00 0.306±0.03 0.095±0.05 0.611±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UN CIL_0005UN_0001 CGP 7:66114604-66420543
CIL_00024I CIL_00024I_0001 CGP 7:66205199-66811187

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143727 Rabgef1-005 retained_intron Mus_musculus 0 231
ENSMUST00000026390 Rabgef1-002 protein_coding Mus_musculus 0 231
ENSMUST00000119027 Rabgef1-004 protein_coding Mus_musculus 0 231
ENSMUST00000148264 Rabgef1-003 protein_coding Mus_musculus 0 231
ENSMUST00000119797 Rabgef1-001 protein_coding Mus_musculus 0 231

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