C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005Y6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035810-ENSDARG00000078593 CGP 7955 9:17954983-18299792
GeneTranscriptPositionBiotype
ENSDARG00000035810 (rgcc)
regulator of cell cycle
ENSDART00000138953 (rgcc-001) 17954983-17966090 protein_coding
ENSDART00000140852 (rgcc-002) 17954993-17956378 retained_intron
CIL_0005Y6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102760-ENSG00000102763 CGP 9606 13:41457559-41961120
GeneTranscriptPositionBiotype
ENSG00000102760 (RGCC)
regulator of cell cycle
ENST00000379359 (RGCC-001) 41457559-41470882 protein_coding
ENST00000487837 (RGCC-002) 41464115-41468844 processed_transcript
ENSG00000102763 (VWA8)
von Willebrand factor A domain containing 8
ENST00000281496 (VWA8-002) 41719337-41961120 protein_coding
ENST00000379302 (VWA8-004) 41865591-41868403 retained_intron
ENST00000379310 (VWA8-005) 41566837-41961084 protein_coding
ENST00000478987 (VWA8-006) 41689433-41696119 processed_transcript
ENSG00000229696 (KARSP1)
lysyl-tRNA synthetase pseudogene 1
ENST00000451871 (KARSP1-001) 41925598-41927349 processed_pseudogene
ENSG00000241406 (RN7SL515P)
RNA, 7SL, cytoplasmic 515, pseudogene
ENST00000463999 (RN7SL515P-201) 41807677-41807973 misc_RNA
ENSG00000278338 (VWA8-AS1)
VWA8 antisense RNA 1 (head to head)
ENST00000611103 (VWA8-AS1-001) 41961169-41981565 antisense
ENST00000612345 (VWA8-AS1-002) 41955808-41980977 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y6_0001ENSDARG00000035810ENSDART00000138953ENSDART00000140852CIL_0005Y6_0002ENSG00000102760ENST00000379359ENST00000487837ENSG00000102763ENST00000281496ENST00000379302ENST00000379310ENST00000478987ENSG00000229696ENST00000451871ENSG00000241406ENST00000463999ENSG00000278338ENST00000611103ENST00000612345
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y6_0001ENSDARG00000035810ENSDART00000138953ENSDART00000140852CIL_0005Y6_0002ENSG00000102760ENST00000379359ENST00000487837ENSG00000102763ENST00000281496ENST00000379310ENSG00000229696ENST00000451871ENSG00000241406ENST00000463999ENSG00000278338ENST00000611103ENST00000612345
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035810 ENSDART00000138953 N/A N/A N/A 12.897±10.52 N/A N/A 34.996±26.11 52.729±13.76 0.402±0.00 N/A 993.332±0.00 N/A N/A N/A
ENSDART00000140852 N/A N/A N/A 0.322±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102760 ENST00000379359 83.350±0.00 7.712±0.00 1.565±0.00 17.551±6.96 16.530±14.80 24.331±20.35 24.155±18.07 20.726±0.00 3.472±2.91 201.360±161.70 6.664±0.60 9.308±3.94 108.597±43.14 11.910±4.05
ENST00000487837 N/A N/A N/A N/A N/A N/A N/A N/A 0.369±0.00 N/A N/A N/A N/A N/A
ENSG00000102763 ENST00000281496 N/A 1.040±0.00 2.159±0.00 4.767±0.00 1.565±0.00 1.749±0.00 3.926±0.00 2.454±0.00 1.692±0.03 4.088±0.00 7.755±0.00 4.397±3.18 0.619±0.14 N/A
ENST00000379302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379310 1.196±0.00 0.744±0.00 1.280±0.00 1.706±0.46 1.642±0.00 1.537±0.99 3.516±2.49 3.118±0.93 2.001±0.91 1.375±0.58 5.152±0.00 1.899±0.63 0.927±0.23 1.214±0.36
ENST00000478987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229696 ENST00000451871 N/A 0.007±0.00 0.282±0.00 0.045±0.00 0.064±0.00 0.174±0.00 0.038±0.01 0.051±0.02 0.006±0.00 0.060±0.00 N/A 0.046±0.02 N/A N/A
ENSG00000241406 ENST00000463999 N/A 0.331±0.00 N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A 0.513±0.00 N/A 0.140±0.00
ENSG00000278338 ENST00000611103 N/A N/A 0.074±0.00 0.045±0.00 0.053±0.03 0.040±0.00 0.050±0.02 0.023±0.00 0.010±0.00 0.092±0.00 N/A 0.027±0.01 0.024±0.01 0.484±0.16
ENST00000612345 N/A N/A N/A 0.026±0.00 N/A N/A N/A 0.144±0.00 N/A 0.438±0.00 N/A N/A N/A N/A

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