C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000607_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060785-ENSDARG00000003444 CGP 7955 13:31744139-31767967
GeneTranscriptPositionBiotype
ENSDARG00000003444 (dhrs7)
dehydrogenase/reductase (SDR family) member 7 		ENSDART00000005670 (dhrs7-001) 31760311-31767967 protein_coding
ENSDARG00000060785 (pcnxl4)
pecanex-like 4 (Drosophila) 		ENSDART00000086018 (pcnxl4-001) 31744139-31759110 protein_coding
ENSDART00000138720 (pcnxl4-002) 31755033-31756037 retained_intron
CIL_000607_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126773-ENSG00000100612 CGP 9606 14:60091911-60169856
GeneTranscriptPositionBiotype
ENSG00000126773 (PCNXL4)
pecanex-like 4 (Drosophila) 		ENST00000317623 (PCNXL4-003) 60091911-60148221 protein_coding
ENST00000391611 (PCNXL4-004) 60091919-60111157 protein_coding
ENST00000406854 (PCNXL4-005) 60091919-60134814 protein_coding
ENST00000406949 (PCNXL4-001) 60091927-60169133 protein_coding
ENST00000483571 (PCNXL4-002) 60115344-60126190 retained_intron
ENST00000553513 (PCNXL4-008) 60115621-60118549 retained_intron
ENST00000553898 (PCNXL4-013) 60147325-60169131 processed_transcript
ENST00000554534 (PCNXL4-012) 60115982-60124273 protein_coding
ENST00000555569 (PCNXL4-007) 60092186-60114980 retained_intron
ENST00000555740 (PCNXL4-006) 60118443-60134809 nonsense_mediated_decay
ENST00000555929 (PCNXL4-010) 60118624-60134227 nonsense_mediated_decay
ENST00000556360 (PCNXL4-011) 60124306-60134085 nonsense_mediated_decay
ENST00000556907 (PCNXL4-009) 60091977-60115770 processed_transcript
ENSG00000258896 (SCOCP1)
short coiled-coil protein pseudogene 1 		ENST00000554676 (SCOCP1-001) 60158976-60159324 processed_pseudogene
CIL_000607_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034501-ENSMUSG00000021094 CGP 10090 12:72536357-72664828
GeneTranscriptPositionBiotype
ENSMUSG00000021094 (Dhrs7)
dehydrogenase/reductase (SDR family) member 7 		ENSMUST00000021512 (Dhrs7-201) 72650356-72664828 protein_coding
ENSMUSG00000034501 (Pcnxl4)
pecanex-like 4 (Drosophila) 		ENSMUST00000044352 (Pcnxl4-201) 72536357-72580213 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000607_0001ENSDARG00000003444ENSDART00000005670ENSDARG00000060785ENSDART00000086018ENSDART00000138720CIL_000607_0002ENSG00000126773ENST00000317623ENST00000391611ENST00000406854ENST00000406949ENST00000483571ENST00000553513ENST00000553898ENST00000554534ENST00000555569ENST00000555740ENST00000555929ENST00000556360ENST00000556907ENSG00000258896ENST00000554676CIL_000607_0003ENSMUSG00000021094ENSMUST00000021512ENSMUSG00000034501ENSMUST00000044352
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000607_0001ENSDARG00000003444ENSDART00000005670ENSDARG00000060785ENSDART00000086018CIL_000607_0002ENSG00000126773ENST00000317623ENST00000391611ENST00000406854ENST00000406949ENST00000555740ENSG00000258896ENST00000554676CIL_000607_0003ENSMUSG00000021094ENSMUST00000021512ENSMUSG00000034501ENSMUST00000044352
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003444 ENSDART00000005670 N/A N/A N/A 22.019±0.00 N/A N/A 6.344±4.54 0.405±0.00 1.940±0.00 N/A 6.414±0.00 N/A N/A N/A
ENSDARG00000060785 ENSDART00000086018 N/A N/A N/A 3.826±2.01 N/A N/A 2.618±0.00 N/A 0.342±0.00 N/A 1.197±0.00 N/A N/A N/A
ENSDART00000138720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126773 ENST00000317623 N/A 1.124±0.00 N/A 0.838±0.06 N/A N/A 0.430±0.06 1.006±0.00 N/A N/A 2.833±0.00 1.103±0.00 0.767±0.00 0.790±0.27
ENST00000391611 N/A N/A N/A N/A 1.758±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406854 3.473±0.00 N/A N/A 3.992±0.00 2.734±0.48 3.709±0.00 2.877±0.64 4.248±0.00 4.351±0.00 2.927±0.00 N/A 5.837±1.07 2.853±0.20 5.983±1.02
ENST00000406949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.569±0.00 N/A N/A 4.905±0.00
ENST00000483571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.406±0.00 N/A 3.946±0.00
ENST00000555929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258896 ENST00000554676 N/A 0.364±0.00 0.907±0.00 N/A 1.801±0.00 N/A 0.123±0.00 0.142±0.00 1.823±0.00 0.600±0.54 3.018±0.00 0.464±0.36 N/A 0.343±0.25
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021094 ENSMUST00000021512 86.291±10.52 70.384±12.15 40.417±1.72 6.725±6.39 71.150±11.03 20.420±2.39 24.193±2.80 21.423±3.02 23.435±13.57 44.276±1.84 5.676±0.56 42.134±6.95 11.246±6.05 8.805±1.74
ENSMUSG00000034501 ENSMUST00000044352 2.787±0.75 2.095±0.52 3.115±0.31 5.899±0.39 2.651±0.29 1.768±0.41 0.959±0.09 1.869±0.51 1.287±0.40 3.404±0.89 0.789±0.20 3.051±0.95 1.476±0.38 2.818±1.42

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