C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00066E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163659-ENSG00000197980 CGP 9606 3:156673235-157046129
GeneTranscriptPositionBiotype
ENSG00000163659 (TIPARP)
TCDD-inducible poly(ADP-ribose) polymerase 		ENST00000295924 (TIPARP-001) 156674342-156706770 protein_coding
ENST00000461166 (TIPARP-003) 156674845-156706750 protein_coding
ENST00000473702 (TIPARP-004) 156675569-156703695 protein_coding
ENST00000481853 (TIPARP-005) 156676664-156705120 protein_coding
ENST00000486483 (TIPARP-002) 156673235-156705139 protein_coding
ENST00000495891 (TIPARP-006) 156681166-156706750 protein_coding
ENST00000542783 (TIPARP-201) 156676664-156706766 protein_coding
ENSG00000174912 (METTL15P1)
methyltransferase like 15 pseudogene 1 		ENST00000481421 (METTL15P1-001) 156713884-156714928 processed_pseudogene
ENSG00000197980 (LEKR1)
leucine, glutamate and lysine rich 1 		ENST00000356539 (LEKR1-201) 156826307-157046129 protein_coding
ENST00000465728 (LEKR1-008) 156825481-156852840 processed_transcript
ENST00000467376 (LEKR1-007) 156826334-156921039 retained_intron
ENST00000470811 (LEKR1-010) 156826307-157046129 protein_coding
ENST00000477399 (LEKR1-002) 156826314-156924625 protein_coding
ENST00000483177 (LEKR1-001) 156826311-156888469 protein_coding
ENST00000485017 (LEKR1-005) 156826682-156852973 processed_transcript
ENST00000489350 (LEKR1-006) 156826329-156979558 processed_transcript
ENST00000491763 (LEKR1-004) 156826359-156925256 protein_coding
ENST00000495252 (LEKR1-009) 156920667-156942797 retained_intron
ENST00000498839 (LEKR1-003) 156826300-156853214 protein_coding
ENSG00000222499 (RN7SKP177)
RNA, 7SK small nuclear pseudogene 177 		ENST00000410567 (RN7SKP177-201) 157017342-157017696 misc_RNA
ENSG00000230457 (PA2G4P4)
proliferation-associated 2G4 pseudogene 4 		ENST00000473864 (PA2G4P4-001) 156809551-156810732 processed_pseudogene
ENSG00000239706 (RP11-6F2.3)
 ENST00000487061 (RP11-6F2.3-001) 156988117-156988712 processed_pseudogene
ENSG00000240875 (LINC00886)
long intergenic non-protein coding RNA 886 		ENST00000472943 (LINC00886-001) 156747346-156817034 lincRNA
ENST00000473352 (LINC00886-002) 156753063-156817062 lincRNA
ENST00000488584 (LINC00886-003) 156750001-156751519 lincRNA
CIL_00066E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034640-ENSMUSG00000074579 CGP 10090 3:65528410-65831159
GeneTranscriptPositionBiotype
ENSMUSG00000034640 (Tiparp)
TCDD-inducible poly(ADP-ribose) polymerase 		ENSMUST00000047906 (Tiparp-001) 65528410-65555145 protein_coding
ENSMUST00000130705 (Tiparp-002) 65528460-65547597 protein_coding
ENSMUST00000154094 (Tiparp-003) 65546040-65552632 processed_transcript
ENSMUSG00000074579 (Lekr1)
leucine, glutamate and lysine rich 1 		ENSMUST00000099075 (Lekr1-001) 65666228-65686179 protein_coding
ENSMUST00000107848 (Lekr1-002) 65666235-65684224 protein_coding
ENSMUST00000161534 (Lekr1-003) 65666282-65773285 protein_coding
ENSMUST00000161794 (Lekr1-004) 65666246-65739695 protein_coding
ENSMUST00000161851 (Lekr1-005) 65666317-65728551 protein_coding
ENSMUST00000177434 (Lekr1-006) 65684053-65831159 protein_coding
ENSMUSG00000074580 (4931440P22Rik)
RIKEN cDNA 4931440P22 gene 		ENSMUST00000099076 (4931440P22Rik-001) 65527523-65529379 protein_coding
ENSMUST00000147424 (4931440P22Rik-003) 65507257-65528184 processed_transcript
ENSMUST00000184377 (4931440P22Rik-002) 65515315-65529371 nonsense_mediated_decay
ENSMUSG00000098944 (Mir8120)
microRNA 8120 		ENSMUST00000185035 (Mir8120-201) 65659288-65659426 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066E_0001ENSG00000163659ENST00000295924ENST00000461166ENST00000473702ENST00000481853ENST00000486483ENST00000495891ENST00000542783ENSG00000174912ENST00000481421ENSG00000197980ENST00000356539ENST00000465728ENST00000467376ENST00000470811ENST00000477399ENST00000483177ENST00000485017ENST00000489350ENST00000491763ENST00000495252ENST00000498839ENSG00000222499ENST00000410567ENSG00000230457ENST00000473864ENSG00000239706ENST00000487061ENSG00000240875ENST00000472943ENST00000473352ENST00000488584CIL_00066E_0002ENSMUSG00000034640ENSMUST00000047906ENSMUST00000130705ENSMUST00000154094ENSMUSG00000074579ENSMUST00000099075ENSMUST00000107848ENSMUST00000161534ENSMUST00000161794ENSMUST00000161851ENSMUST00000177434ENSMUSG00000074580ENSMUST00000099076ENSMUST00000147424ENSMUST00000184377ENSMUSG00000098944ENSMUST00000185035
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066E_0001ENSG00000163659ENST00000295924ENST00000461166ENST00000473702ENST00000481853ENST00000495891ENST00000542783ENSG00000174912ENST00000481421ENSG00000197980ENST00000356539ENST00000465728ENST00000467376ENST00000470811ENST00000483177ENST00000485017ENST00000489350ENST00000491763ENST00000495252ENST00000498839ENSG00000222499ENST00000410567ENSG00000230457ENST00000473864ENSG00000239706ENST00000487061ENSG00000240875ENST00000472943ENST00000473352ENST00000488584CIL_00066E_0002ENSMUSG00000034640ENSMUST00000047906ENSMUSG00000074579ENSMUST00000099075ENSMUST00000107848ENSMUST00000161534ENSMUST00000161851ENSMUST00000177434ENSMUSG00000074580ENSMUST00000099076ENSMUST00000147424ENSMUST00000184377ENSMUSG00000098944ENSMUST00000185035
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163659 ENST00000295924 2.506±0.00 1.371±0.00 1.815±0.00 4.232±2.57 3.797±0.01 2.969±0.44 5.291±4.08 1.634±0.71 3.249±1.54 7.426±1.94 1.395±0.10 7.218±5.18 1.498±0.30 12.869±2.17
ENST00000461166 N/A N/A N/A N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000473702 N/A N/A N/A N/A N/A N/A N/A 1.261±0.00 N/A N/A 1.770±0.12 N/A N/A N/A
ENST00000481853 N/A N/A 1.906±0.00 2.583±0.00 7.465±0.00 3.156±0.00 3.734±1.14 N/A 8.115±0.00 N/A N/A 9.306±4.20 3.192±0.00 25.197±16.13
ENST00000486483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495891 0.789±0.00 0.705±0.00 N/A 5.966±0.00 2.187±0.00 2.424±0.00 6.222±0.00 2.961±0.00 1.156±0.00 2.969±0.00 N/A 4.502±0.00 1.002±0.00 9.309±0.00
ENST00000542783 1.160±0.00 1.510±0.00 N/A N/A N/A N/A N/A 2.728±0.00 N/A N/A 1.627±0.00 8.311±0.00 0.406±0.21 N/A
ENSG00000174912 ENST00000481421 N/A 0.023±0.00 0.393±0.00 0.203±0.17 0.874±0.00 0.081±0.00 0.199±0.16 0.048±0.00 0.101±0.00 0.360±0.00 0.317±0.00 0.417±0.42 0.183±0.10 0.172±0.13
ENSG00000197980 ENST00000356539 N/A N/A 0.012±0.00 0.016±0.00 0.027±0.00 N/A N/A N/A N/A N/A N/A 0.027±0.01 0.015±0.00 5.053±0.00
ENST00000465728 N/A N/A N/A N/A N/A N/A N/A 0.182±0.00 N/A N/A N/A 0.940±0.00 N/A N/A
ENST00000467376 N/A N/A N/A 0.234±0.00 N/A N/A N/A N/A N/A N/A N/A 0.564±0.00 N/A N/A
ENST00000470811 0.004±0.00 N/A N/A N/A N/A 0.003±0.00 N/A 0.013±0.00 N/A 0.028±0.00 N/A 0.035±0.00 N/A 0.748±0.00
ENST00000477399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483177 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A 0.234±0.00 0.216±0.00 N/A 0.178±0.04 N/A N/A
ENST00000485017 0.018±0.00 N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.739±0.00
ENST00000489350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 0.114±0.00 N/A N/A
ENST00000491763 0.007±0.00 0.231±0.00 0.056±0.00 N/A 0.350±0.19 0.097±0.07 0.060±0.01 0.214±0.10 0.097±0.00 0.069±0.00 N/A 0.144±0.08 0.111±0.00 0.803±0.00
ENST00000495252 N/A N/A 0.296±0.00 N/A N/A N/A N/A N/A 0.126±0.00 1.484±0.00 N/A N/A N/A N/A
ENST00000498839 N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A 1.224±0.00 N/A N/A N/A N/A
ENSG00000222499 ENST00000410567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A 1.347±0.00
ENSG00000230457 ENST00000473864 0.011±0.00 0.046±0.00 0.172±0.00 0.048±0.00 0.610±0.59 0.591±0.55 0.276±0.20 0.765±0.72 0.564±0.53 0.440±0.00 0.204±0.00 0.354±0.44 0.031±0.01 0.153±0.11
ENSG00000239706 ENST00000487061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.249±0.00
ENSG00000240875 ENST00000472943 0.116±0.00 0.322±0.00 0.905±0.00 0.097±0.02 0.550±0.11 0.077±0.00 0.271±0.14 0.498±0.24 0.143±0.00 0.439±0.05 0.205±0.02 0.387±0.19 0.075±0.01 0.460±0.00
ENST00000473352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00 N/A N/A
ENST00000488584 0.097±0.00 N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A 0.166±0.00 0.216±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034640 ENSMUST00000047906 7.110±0.43 7.938±0.85 10.202±3.25 3.163±1.50 6.871±1.77 4.598±1.09 2.145±0.30 3.799±0.75 1.540±0.38 7.290±2.36 4.085±0.90 19.693±9.05 5.833±0.94 2.504±0.67
ENSMUST00000130705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000074579 ENSMUST00000099075 0.729±0.17 0.194±0.05 1.964±0.40 1.487±0.94 0.361±0.25 0.275±0.16 0.565±0.07 0.958±0.37 0.396±0.21 0.648±0.19 0.090±0.03 1.003±0.41 0.376±0.21 1.123±0.17
ENSMUST00000107848 N/A 0.171±0.00 N/A 11.017±0.00 0.607±0.00 0.204±0.00 N/A 0.547±0.00 N/A N/A 0.102±0.00 18.272±0.00 6.894±4.43 87.181±0.00
ENSMUST00000161534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.01 N/A N/A
ENSMUST00000161794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161851 N/A 0.123±0.05 N/A N/A N/A N/A N/A N/A N/A 0.175±0.01 N/A 0.145±0.00 N/A N/A
ENSMUST00000177434 0.175±0.00 N/A N/A N/A N/A 0.076±0.00 N/A 0.203±0.00 N/A N/A 0.028±0.01 0.277±0.17 0.170±0.00 3.695±3.98
ENSMUSG00000074580 ENSMUST00000099076 N/A 0.683±0.18 N/A N/A 1.013±0.03 0.336±0.11 N/A 0.781±0.11 0.122±0.00 0.866±0.04 N/A 1.484±0.41 N/A 1.944±0.11
ENSMUST00000147424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.088±0.11
ENSMUST00000184377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.934±1.30
ENSMUSG00000098944 ENSMUST00000185035 442.564±0.00 N/A N/A N/A N/A 874.310±342.89 N/A N/A N/A 731.001±295.18 N/A 18.032±0.00 24.736±0.00 274.129±263.23

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