C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000695_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000053066-ENSDARG00000095897 CGP 7955 6:49833530-49853806
GeneTranscriptPositionBiotype
ENSDARG00000016255 (CHMP4B (2 of 2))
charged multivesicular body protein 4B 		ENSDART00000023515 (CHMP4B (2 of 2)-001) 49853131-49871986 protein_coding
ENSDARG00000053066 (tubb1)
tubulin, beta 1 class VI 		ENSDART00000075040 (tubb1-001) 49833530-49840084 protein_coding
ENSDARG00000084833 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120233 (5S_rRNA.851-201) 49843556-49843670 rRNA
CIL_000695_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101162-ENSG00000124172 CGP 9606 20:59019254-59032382
GeneTranscriptPositionBiotype
ENSG00000124172 (ATP5E)
ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit 		ENST00000243997 (ATP5E-001) 59025467-59032382 protein_coding
ENST00000395659 (ATP5E-002) 59028678-59032345 protein_coding
ENST00000395663 (ATP5E-003) 59025973-59032292 protein_coding
CIL_000695_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000016255-ENSMUSG00000016252 CGP 10090 2:174450695-174464105
GeneTranscriptPositionBiotype
ENSMUSG00000016252 (Atp5e)
ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit 		ENSMUST00000016396 (Atp5e-001) 174461072-174464105 protein_coding
ENSMUST00000149191 (Atp5e-002) 174461075-174464049 retained_intron
ENSMUST00000153132 (Atp5e-003) 174462516-174464089 retained_intron
ENSMUSG00000016255 (Tubb1)
tubulin, beta 1 class VI 		ENSMUST00000016399 (Tubb1-001) 174450695-174457882 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000695_0001ENSDARG00000016255ENSDART00000023515ENSDARG00000053066ENSDART00000075040ENSDARG00000084833ENSDART00000120233CIL_000695_0002ENSG00000124172ENST00000243997ENST00000395659ENST00000395663CIL_000695_0003ENSMUSG00000016252ENSMUST00000016396ENSMUST00000149191ENSMUST00000153132ENSMUSG00000016255ENSMUST00000016399
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000695_0001ENSDARG00000016255ENSDART00000023515ENSDARG00000053066ENSDART00000075040ENSDARG00000084833ENSDART00000120233CIL_000695_0002ENSG00000124172ENST00000243997ENST00000395659ENST00000395663CIL_000695_0003ENSMUSG00000016252ENSMUST00000016396ENSMUST00000149191ENSMUSG00000016255ENSMUST00000016399
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016255 ENSDART00000023515 N/A N/A N/A 18.315±7.13 N/A N/A 18.527±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000053066 ENSDART00000075040 N/A N/A N/A 0.325±0.28 N/A N/A 3.952±1.28 1.256±0.96 0.027±0.00 N/A 0.217±0.00 N/A N/A N/A
ENSDARG00000084833 ENSDART00000120233 N/A N/A N/A 168.684±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124172 ENST00000243997 4.432±0.00 7.393±0.00 19.119±0.00 26.052±21.72 14.072±6.34 14.793±8.85 20.016±6.56 20.130±13.31 11.664±3.43 14.208±1.23 22.492±16.17 13.322±8.70 9.741±5.24 4.634±2.77
ENST00000395659 11.178±0.00 19.070±0.00 N/A 2.167±0.00 14.009±0.00 6.928±0.00 6.195±0.00 8.824±0.00 4.016±0.00 N/A 6.075±0.00 3.131±0.00 1.582±0.00 4.678±3.56
ENST00000395663 11.606±0.00 22.755±0.00 N/A 13.340±0.00 26.091±0.00 22.062±0.00 50.714±0.00 27.152±0.00 39.697±0.00 77.171±0.00 34.409±0.00 22.979±18.37 26.050±15.09 11.328±7.39
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016252 ENSMUST00000016396 142.523±19.31 250.047±17.60 302.943±19.96 134.932±24.82 189.647±74.08 217.603±21.42 469.151±111.50 436.190±78.04 250.563±49.94 126.842±14.74 630.253±59.66 146.135±65.88 188.981±38.51 140.319±40.25
ENSMUST00000149191 N/A N/A N/A N/A 1.136±0.00 N/A N/A N/A N/A N/A N/A 2.335±0.08 N/A N/A
ENSMUST00000153132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000016255 ENSMUST00000016399 0.068±0.01 0.242±0.09 0.044±0.03 0.244±0.02 0.221±0.11 0.088±0.03 2.299±0.31 0.207±0.06 9.987±11.91 8.898±1.26 0.075±0.02 0.182±0.10 2.498±1.72 0.050±0.02

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