C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006A3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000268629-ENSG00000123572 CGP 9606 X:105218929-105958610
GeneTranscriptPositionBiotype
ENSG00000123572 (NRK)
Nik related kinase 		ENST00000243300 (NRK-001) 105822543-105958610 protein_coding
ENST00000428173 (NRK-004) 105822581-105939947 nonsense_mediated_decay
ENST00000536164 (NRK-005) 105822553-105895363 protein_coding
ENST00000540278 (NRK-002) 105948438-105956593 protein_coding
ENSG00000181819 (KCTD9P2)
potassium channel tetramerization domain containing 9 pseudogene 2 		ENST00000512203 (KCTD9P2-001) 105405647-105407039 processed_pseudogene
ENSG00000189108 (IL1RAPL2)
interleukin 1 receptor accessory protein-like 2 		ENST00000344799 (IL1RAPL2-201) 105717366-105767661 protein_coding
ENST00000372582 (IL1RAPL2-001) 104566315-105767829 protein_coding
ENST00000485671 (IL1RAPL2-002) 105740649-105765345 processed_transcript
ENSG00000222161 (Z97356.1)
 ENST00000410229 (Z97356.1-201) 105860689-105860762 miRNA
ENSG00000268629 (TEX13A)
testis expressed 13A 		ENST00000600991 (TEX13A-001) 105218929-105220674 protein_coding
ENST00000609007 (TEX13A-002) 105218931-105220674 protein_coding
CIL_0006A3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071686-ENSMUSG00000052854 CGP 10090 X:138208165-139010532
GeneTranscriptPositionBiotype
ENSMUSG00000052854 (Nrk)
Nik related kinase 		ENSMUST00000064937 (Nrk-201) 138914430-139009092 protein_coding
ENSMUST00000113052 (Nrk-001) 138914431-139010532 protein_coding
ENSMUST00000131829 (Nrk-002) 138914431-139009804 nonsense_mediated_decay
ENSMUST00000142132 (Nrk-004) 138914431-138966280 processed_transcript
ENSMUST00000155201 (Nrk-003) 138982718-138989778 retained_intron
ENSMUSG00000059203 (Il1rapl2)
interleukin 1 receptor accessory protein-like 2 		ENSMUST00000075471 (Il1rapl2-201) 137651720-138846624 protein_coding
ENSMUST00000113063 (Il1rapl2-001) 137570608-138846946 protein_coding
ENSMUST00000130879 (Il1rapl2-002) 137571019-138506311 retained_intron
ENSMUSG00000071686 (Tex13a)
testis expressed 13A 		ENSMUST00000096314 (Tex13a-001) 138208165-138209580 protein_coding
ENSMUSG00000081017 (Gm15000)
predicted gene 15000 		ENSMUST00000118275 (Gm15000-001) 138522506-138523748 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006A3_0001ENSG00000123572ENST00000243300ENST00000428173ENST00000536164ENST00000540278ENSG00000181819ENST00000512203ENSG00000189108ENST00000344799ENST00000372582ENST00000485671ENSG00000222161ENST00000410229ENSG00000268629ENST00000600991ENST00000609007CIL_0006A3_0002ENSMUSG00000052854ENSMUST00000064937ENSMUST00000113052ENSMUST00000131829ENSMUST00000142132ENSMUST00000155201ENSMUSG00000059203ENSMUST00000075471ENSMUST00000113063ENSMUST00000130879ENSMUSG00000071686ENSMUST00000096314ENSMUSG00000081017ENSMUST00000118275
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006A3_0001ENSG00000123572ENST00000243300ENST00000428173ENST00000540278ENSG00000181819ENST00000512203ENSG00000189108ENST00000344799ENST00000372582ENST00000485671ENSG00000222161ENST00000410229ENSG00000268629ENST00000600991ENST00000609007CIL_0006A3_0002ENSMUSG00000052854ENSMUST00000064937ENSMUST00000113052ENSMUST00000131829ENSMUST00000142132ENSMUST00000155201ENSMUSG00000059203ENSMUST00000075471ENSMUST00000113063ENSMUST00000130879ENSMUSG00000071686ENSMUST00000096314ENSMUSG00000081017ENSMUST00000118275
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123572 ENST00000243300 0.227±0.00 N/A 1.294±0.00 N/A 0.414±0.30 0.226±0.07 0.471±0.12 1.021±0.98 0.488±0.47 0.198±0.00 0.104±0.00 5.959±6.32 6.909±4.81 2.586±1.17
ENST00000428173 N/A 0.026±0.00 1.613±0.00 0.007±0.00 0.143±0.00 N/A N/A N/A N/A N/A 0.094±0.00 N/A N/A N/A
ENST00000536164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540278 N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A
ENSG00000181819 ENST00000512203 N/A 0.012±0.00 N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A 0.025±0.00 N/A N/A
ENSG00000189108 ENST00000344799 N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A 0.081±0.01 0.209±0.00 0.393±0.00
ENST00000372582 N/A N/A 0.085±0.00 0.206±0.00 0.063±0.02 0.008±0.00 0.041±0.00 0.426±0.39 0.008±0.00 N/A N/A 0.039±0.01 0.148±0.15 0.284±0.14
ENST00000485671 0.110±0.00 0.045±0.00 0.510±0.00 N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A 0.035±0.00 0.161±0.00 N/A
ENSG00000222161 ENST00000410229 N/A N/A N/A N/A N/A N/A N/A 0.336±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000268629 ENST00000600991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.148±0.00
ENST00000609007 N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.095±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052854 ENSMUST00000064937 N/A 0.029±0.00 N/A N/A 0.063±0.01 0.029±0.02 N/A 0.018±0.00 N/A 0.037±0.00 0.009±0.00 0.179±0.10 N/A N/A
ENSMUST00000113052 0.025±0.01 0.095±0.03 0.013±0.00 0.185±0.00 0.072±0.01 0.013±0.00 0.051±0.00 0.017±0.01 0.726±0.45 0.065±0.02 0.029±0.01 0.269±0.13 123.033±35.48 0.130±0.01
ENSMUST00000131829 N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A 0.041±0.00 0.016±0.00 0.125±0.00 N/A N/A
ENSMUST00000142132 0.026±0.00 0.058±0.01 N/A N/A 0.084±0.05 N/A N/A 0.029±0.00 N/A N/A N/A 0.549±0.39 N/A 0.377±0.00
ENSMUST00000155201 N/A N/A N/A 0.015±0.00 N/A 0.069±0.00 0.071±0.00 0.038±0.01 0.047±0.02 0.070±0.00 0.023±0.00 0.177±0.00 N/A N/A
ENSMUSG00000059203 ENSMUST00000075471 N/A 0.147±0.06 N/A 1.410±0.00 0.056±0.00 N/A N/A N/A 0.005±0.00 N/A 0.009±0.00 0.011±0.00 0.016±0.01 0.024±0.00
ENSMUST00000113063 N/A 0.045±0.00 N/A 0.392±0.33 N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A 0.011±0.01 N/A
ENSMUST00000130879 N/A 0.091±0.07 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A 0.017±0.00
ENSMUSG00000071686 ENSMUST00000096314 N/A N/A N/A 0.011±0.00 N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A N/A 20.139±2.25
ENSMUSG00000081017 ENSMUST00000118275 N/A N/A N/A 0.018±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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