C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006FO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077326-ENSDARG00000077427 CGP 7955 16:33211929-33237847
GeneTranscriptPositionBiotype
ENSDARG00000077326 (slc45a4)
solute carrier family 45, member 4 		ENSDART00000085761 (slc45a4-001) 33211929-33236091 protein_coding
ENSDART00000132643 (slc45a4-002) 33230746-33235209 protein_coding
ENSDART00000156804 (slc45a4-201) 33213044-33231006 protein_coding
ENSDARG00000077427 (GPR20 (2 of 2))
G protein-coupled receptor 20 		ENSDART00000109940 (GPR20 (2 of 2)-201) 33236807-33237847 protein_coding
CIL_0006FO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000022567-ENSG00000204882 CGP 9606 8:141207166-141367267
GeneTranscriptPositionBiotype
ENSG00000022567 (SLC45A4)
solute carrier family 45, member 4 		ENST00000024061 (SLC45A4-001) 141210601-141228574 protein_coding
ENST00000517878 (SLC45A4-003) 141210529-141254229 protein_coding
ENST00000519067 (SLC45A4-002) 141207166-141228570 protein_coding
ENST00000519986 (SLC45A4-004) 141219747-141230348 protein_coding
ENST00000520137 (SLC45A4-005) 141218774-141308305 protein_coding
ENST00000521804 (SLC45A4-006) 141254101-141308292 processed_transcript
ENSG00000204882 (GPR20)
G protein-coupled receptor 20 		ENST00000377741 (GPR20-001) 141356500-141367267 protein_coding
ENSG00000253307 (RP11-10J21.4)
 ENST00000517658 (RP11-10J21.4-001) 141252286-141253292 antisense
ENSG00000253595 (LINC01300)
long intergenic non-protein coding RNA 1300 		ENST00000518232 (LINC01300-002) 141342325-141344621 antisense
ENST00000521073 (LINC01300-001) 141340549-141344621 antisense
ENSG00000254197 (RP11-10J21.5)
 ENST00000520606 (RP11-10J21.5-001) 141278228-141292862 lincRNA
ENSG00000254291 (RP11-10J21.6)
 ENST00000523604 (RP11-10J21.6-001) 141326130-141327137 antisense
ENSG00000261655 (CTD-3064M3.3)
 ENST00000562459 (CTD-3064M3.3-001) 141353403-141355365 sense_overlapping
ENSG00000280035 (RP11-10J21.2)
 ENST00000624864 (RP11-10J21.2-001) 141224288-141226947 TEC
CIL_0006FO_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079020-ENSMUSG00000045281 CGP 10090 15:73577424-73707505
GeneTranscriptPositionBiotype
ENSMUSG00000045281 (Gpr20)
G protein-coupled receptor 20 		ENSMUST00000064166 (Gpr20-001) 73694604-73707505 protein_coding
ENSMUSG00000099958 (RP24-244H15.1)
RIKEN cDNA 1700010B13 gene 		ENSMUST00000188278 (RP24-244H15.1-002) 73645874-73647602 retained_intron
ENSMUST00000189435 (RP24-244H15.1-001) 73645852-73652347 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FO_0001ENSDARG00000077326ENSDART00000085761ENSDART00000132643ENSDART00000156804ENSDARG00000077427ENSDART00000109940CIL_0006FO_0002ENSG00000022567ENST00000024061ENST00000517878ENST00000519067ENST00000519986ENST00000520137ENST00000521804ENSG00000204882ENST00000377741ENSG00000253307ENST00000517658ENSG00000253595ENST00000518232ENST00000521073ENSG00000254197ENST00000520606ENSG00000254291ENST00000523604ENSG00000261655ENST00000562459ENSG00000280035ENST00000624864CIL_0006FO_0003ENSMUSG00000045281ENSMUST00000064166ENSMUSG00000099958ENSMUST00000188278ENSMUST00000189435
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FO_0001ENSDARG00000077326ENSDART00000085761ENSDART00000156804ENSDARG00000077427ENSDART00000109940CIL_0006FO_0002ENSG00000022567ENST00000024061ENST00000517878ENST00000519067ENST00000521804ENSG00000204882ENST00000377741ENSG00000253307ENST00000517658ENSG00000253595ENST00000518232ENST00000521073ENSG00000254197ENST00000520606ENSG00000254291ENST00000523604ENSG00000261655ENST00000562459ENSG00000280035ENST00000624864CIL_0006FO_0003ENSMUSG00000045281ENSMUST00000064166ENSMUSG00000099958ENSMUST00000188278ENSMUST00000189435
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000077326 ENSDART00000085761 N/A N/A N/A 2.633±0.73 N/A N/A 3.349±0.71 5.864±1.10 0.234±0.00 N/A 1.560±0.00 N/A N/A N/A
ENSDART00000132643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156804 N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A N/A N/A N/A
ENSDARG00000077427 ENSDART00000109940 N/A N/A N/A 0.172±0.03 N/A N/A 0.103±0.03 0.157±0.00 N/A N/A 0.143±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000022567 ENST00000024061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.280±0.00 N/A
ENST00000517878 0.637±0.00 1.223±0.00 N/A 2.017±0.00 0.609±0.24 0.471±0.00 0.472±0.21 0.276±0.00 1.112±0.00 0.327±0.00 0.336±0.00 2.520±2.74 3.538±1.29 7.567±0.00
ENST00000519067 N/A 0.241±0.00 N/A 0.663±0.00 0.520±0.00 N/A 0.159±0.00 N/A 0.258±0.17 1.055±0.00 0.303±0.26 0.675±0.01 0.463±0.00 N/A
ENST00000519986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521804 N/A N/A 3.886±0.00 24.104±0.00 5.607±0.00 2.220±0.00 3.409±0.00 N/A 10.450±0.00 1.843±0.00 N/A 10.833±0.00 N/A N/A
ENSG00000204882 ENST00000377741 0.175±0.00 0.282±0.00 0.307±0.00 0.280±0.13 0.769±0.52 N/A 0.227±0.00 0.237±0.00 0.110±0.07 0.937±0.00 N/A 0.661±0.05 0.483±0.16 0.420±0.24
ENSG00000253307 ENST00000517658 0.226±0.00 0.251±0.00 0.792±0.00 0.276±0.00 0.343±0.14 0.784±0.00 N/A N/A N/A 1.178±0.47 N/A 0.163±0.03 0.167±0.00 0.515±0.32
ENSG00000253595 ENST00000518232 N/A N/A N/A 0.068±0.00 0.251±0.00 N/A N/A N/A N/A N/A N/A 0.071±0.00 0.093±0.01 0.110±0.00
ENST00000521073 N/A 0.024±0.00 N/A N/A N/A 0.208±0.00 N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A
ENSG00000254197 ENST00000520606 N/A 0.078±0.00 2.186±0.00 N/A N/A N/A N/A N/A 0.358±0.00 N/A N/A N/A N/A 0.169±0.00
ENSG00000254291 ENST00000523604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.239±0.00
ENSG00000261655 ENST00000562459 0.649±0.00 0.508±0.00 N/A 0.113±0.00 0.687±0.00 N/A 0.389±0.00 0.694±0.00 0.107±0.00 1.075±0.00 0.297±0.00 1.350±0.45 0.843±0.11 0.561±0.40
ENSG00000280035 ENST00000624864 0.021±0.00 0.211±0.00 0.148±0.00 0.130±0.00 0.264±0.16 0.027±0.00 0.058±0.03 0.071±0.01 0.087±0.07 0.343±0.22 0.059±0.00 0.074±0.04 0.077±0.04 0.086±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045281 ENSMUST00000064166 0.671±0.06 0.210±0.09 1.566±0.08 0.105±0.05 0.490±0.18 22.537±8.81 0.482±0.15 0.254±0.08 0.030±0.02 0.170±0.01 0.129±0.06 1.357±0.63 0.849±0.67 0.328±0.15
ENSMUSG00000099958 ENSMUST00000188278 0.035±0.01 N/A N/A 0.047±0.01 N/A N/A N/A N/A 0.036±0.01 0.032±0.00 N/A 0.060±0.04 0.042±0.02 2.018±1.19
ENSMUST00000189435 0.056±0.02 N/A 0.050±0.00 N/A 0.027±0.00 N/A 0.019±0.00 N/A 0.018±0.01 N/A 0.042±0.03 N/A 0.020±0.00 6.848±4.26

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