C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 45, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000022567 SLC45A4 9606 - 8:141207166-141308305 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000024061 SLC45A4-001 141210601-141228574 protein_coding
  ENST00000517878 SLC45A4-003 141210529-141254229 protein_coding
  ENST00000519067 SLC45A4-002 141207166-141228570 protein_coding
  ENST00000519986 SLC45A4-004 141219747-141230348 protein_coding
  ENST00000520137 SLC45A4-005 141218774-141308305 protein_coding
  ENST00000521804 SLC45A4-006 141254101-141308292 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000024061ENST00000517878ENST00000519067ENST00000521804
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000024061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.280±0.00 N/A
ENST00000517878 0.637±0.00 1.223±0.00 N/A 2.017±0.00 0.609±0.24 0.471±0.00 0.472±0.21 0.276±0.00 1.112±0.00 0.327±0.00 0.336±0.00 2.520±2.74 3.538±1.29 7.567±0.00
ENST00000519067 N/A 0.241±0.00 N/A 0.663±0.00 0.520±0.00 N/A 0.159±0.00 N/A 0.258±0.17 1.055±0.00 0.303±0.26 0.675±0.01 0.463±0.00 N/A
ENST00000521804 N/A N/A 3.886±0.00 24.104±0.00 5.607±0.00 2.220±0.00 3.409±0.00 N/A 10.450±0.00 1.843±0.00 N/A 10.833±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WG CIL_0007WG_0001 VISTA 8:141111247-141716252
CIL_0000X9 CIL_0000X9_0002 CGP 8:141117278-141308305
CIL_0006FO CIL_0006FO_0002 CGP 8:141207166-141367267

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021820 SLC45A4 (1 of 2) solute carrier family 45, member 4 protein_coding Danio_rerio
ENSDARG00000077326 slc45a4 solute carrier family 45, member 4 protein_coding Danio_rerio
ENSMUSG00000079020 Slc45a4 solute carrier family 45, member 4 protein_coding Mus_musculus

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