C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006GV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136478-ENSG00000261371 CGP 9606 17:64147227-64413776
GeneTranscriptPositionBiotype
ENSG00000136478 (TEX2)
testis expressed 2
ENST00000258991 (TEX2-002) 64147227-64263227 protein_coding
ENST00000577489 (TEX2-008) 64154947-64188454 retained_intron
ENST00000581812 (TEX2-009) 64150844-64155220 processed_transcript
ENST00000583097 (TEX2-003) 64147674-64230756 protein_coding
ENST00000583501 (TEX2-004) 64148883-64212719 protein_coding
ENST00000583738 (TEX2-007) 64214090-64263247 protein_coding
ENST00000583922 (TEX2-006) 64214061-64256091 protein_coding
ENST00000584379 (TEX2-001) 64147687-64263301 protein_coding
ENST00000584498 (TEX2-005) 64147441-64156234 retained_intron
ENST00000615733 (TEX2-201) 64147674-64230756 protein_coding
ENSG00000239823 (Y_RNA)
Y RNA
ENST00000497848 (Y_RNA.1-858) 64390158-64390263 misc_RNA
ENSG00000256358 (RPL31P57)
ribosomal protein L31 pseudogene 57
ENST00000461109 (RPL31P57-001) 64308316-64308690 processed_pseudogene
CIL_0006GV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040548-ENSMUSG00000020717 CGP 10090 11:106502147-106750628
GeneTranscriptPositionBiotype
ENSMUSG00000040548 (Tex2)
testis expressed gene 2
ENSMUST00000042780 (Tex2-001) 106502147-106612930 protein_coding
ENSMUST00000103070 (Tex2-002) 106544058-106579113 protein_coding
ENSMUST00000128933 (Tex2-003) 106568098-106613423 protein_coding
ENSMUST00000153870 (Tex2-004) 106568483-106580600 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GV_0001ENSG00000136478ENST00000258991ENST00000577489ENST00000581812ENST00000583097ENST00000583501ENST00000583738ENST00000583922ENST00000584379ENST00000584498ENST00000615733ENSG00000239823ENST00000497848ENSG00000256358ENST00000461109CIL_0006GV_0002ENSMUSG00000040548ENSMUST00000042780ENSMUST00000103070ENSMUST00000128933ENSMUST00000153870
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GV_0001ENSG00000136478ENST00000258991ENST00000581812ENST00000583097ENST00000583501ENST00000584379ENSG00000239823ENST00000497848ENSG00000256358ENST00000461109CIL_0006GV_0002ENSMUSG00000040548ENSMUST00000042780ENSMUST00000103070ENSMUST00000128933
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136478 ENST00000258991 N/A 1.389±0.00 0.686±0.00 N/A N/A 3.482±0.00 0.961±0.00 N/A N/A 1.685±0.00 N/A 2.478±1.72 1.322±0.00 5.741±0.00
ENST00000577489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.918±0.00 N/A N/A
ENST00000583097 N/A N/A 1.945±0.00 2.168±0.00 1.260±0.00 1.775±0.00 N/A N/A N/A N/A N/A 3.854±0.00 0.622±0.00 4.991±0.00
ENST00000583501 N/A N/A N/A 2.370±0.00 N/A N/A N/A N/A N/A 1.702±0.00 N/A 1.741±0.00 2.682±0.00 11.626±0.00
ENST00000583738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584379 8.814±0.00 4.270±0.00 N/A 21.097±0.00 6.954±4.91 6.246±0.00 5.634±2.98 6.073±3.30 4.986±3.02 5.681±4.20 7.852±2.09 6.589±4.25 3.486±0.37 24.217±5.01
ENST00000584498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239823 ENST00000497848 0.973±0.00 1.123±0.00 N/A N/A 77.461±0.00 1.267±0.00 137.245±0.00 N/A N/A 1.659±0.00 N/A N/A N/A N/A
ENSG00000256358 ENST00000461109 N/A 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A 0.163±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040548 ENSMUST00000042780 8.555±0.68 6.690±0.94 3.567±1.13 6.552±4.43 8.557±2.33 7.515±1.31 5.346±0.60 12.871±2.47 13.976±10.91 5.590±2.47 12.220±3.40 11.675±3.88 25.870±6.83 56.836±21.38
ENSMUST00000103070 5.154±2.00 3.280±0.97 N/A N/A 3.407±1.39 N/A 2.692±0.00 N/A N/A 1.969±0.00 N/A 4.467±1.25 N/A 33.846±7.80
ENSMUST00000128933 N/A 9.115±1.52 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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