C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: testis expressed gene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042780 Tex2-001 ENSMUSG00000040548 10090 - 11:106502147-106612930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042780
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042780 8.555±0.68 6.690±0.94 3.567±1.13 6.552±4.43 8.557±2.33 7.515±1.31 5.346±0.60 12.871±2.47 13.976±10.91 5.590±2.47 12.220±3.40 11.675±3.88 25.870±6.83 56.836±21.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WB CIL_0004WB_0003 CGP 11:106394650-106613423
CIL_0006GV CIL_0006GV_0002 CGP 11:106502147-106750628

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258991 TEX2-002 protein_coding Homo_sapiens 0 4115
ENST00000577489 TEX2-008 retained_intron Homo_sapiens 0 671
ENST00000581812 TEX2-009 processed_transcript Homo_sapiens 0 582
ENST00000583097 TEX2-003 protein_coding Homo_sapiens 0 4159
ENST00000583501 TEX2-004 protein_coding Homo_sapiens 0 2303
ENST00000584379 TEX2-001 protein_coding Homo_sapiens 0 4211
ENST00000584498 TEX2-005 retained_intron Homo_sapiens 0 586
ENST00000615733 TEX2-201 protein_coding Homo_sapiens 0 4159

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