C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006I1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010586-ENSDARG00000077237 CGP 7955 7:35950693-36001512
GeneTranscriptPositionBiotype
ENSDARG00000010586 (tex9)
testis expressed 9 		ENSDART00000024869 (tex9-201) 35950693-35960726 protein_coding
ENSDARG00000077237 (CU075695.3)
Uncharacterized protein 		ENSDART00000111303 (CU075695.3-201) 35961797-36001512 protein_coding
CIL_0006I1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000090626-ENSMUSG00000037674 CGP 10090 9:72450394-72622937
GeneTranscriptPositionBiotype
ENSMUSG00000032221 (Mns1)
meiosis-specific nuclear structural protein 1 		ENSMUST00000034746 (Mns1-001) 72438535-72459199 protein_coding
ENSMUST00000183809 (Mns1-002) 72438011-72448729 protein_coding
ENSMUST00000184604 (Mns1-003) 72438526-72452742 protein_coding
ENSMUSG00000037674 (Rfx7)
regulatory factor X, 7 		ENSMUST00000093820 (Rfx7-201) 72532240-72622937 protein_coding
ENSMUST00000163401 (Rfx7-001) 72532240-72622829 protein_coding
ENSMUST00000183372 (Rfx7-005) 72532609-72612423 protein_coding
ENSMUST00000183601 (Rfx7-006) 72610389-72612474 retained_intron
ENSMUST00000184015 (Rfx7-002) 72532735-72612486 protein_coding
ENSMUST00000184851 (Rfx7-004) 72532243-72605019 processed_transcript
ENSMUST00000185177 (Rfx7-003) 72599598-72602355 retained_intron
ENSMUSG00000090626 (Tex9)
testis expressed gene 9 		ENSMUST00000085358 (Tex9-003) 72458572-72491956 protein_coding
ENSMUST00000183399 (Tex9-008) 72460344-72475263 retained_intron
ENSMUST00000183428 (Tex9-006) 72461975-72488036 nonsense_mediated_decay
ENSMUST00000183501 (Tex9-016) 72477837-72486795 protein_coding
ENSMUST00000183551 (Tex9-013) 72477737-72478603 retained_intron
ENSMUST00000183574 (Tex9-009) 72461076-72492101 protein_coding
ENSMUST00000183856 (Tex9-005) 72461103-72492207 nonsense_mediated_decay
ENSMUST00000184066 (Tex9-004) 72461926-72491961 retained_intron
ENSMUST00000184125 (Tex9-001) 72459720-72492101 protein_coding
ENSMUST00000184312 (Tex9-002) 72450394-72491956 nonsense_mediated_decay
ENSMUST00000184557 (Tex9-007) 72461179-72492101 nonsense_mediated_decay
ENSMUST00000184624 (Tex9-012) 72480419-72491935 retained_intron
ENSMUST00000184734 (Tex9-011) 72461945-72480303 processed_transcript
ENSMUST00000184831 (Tex9-014) 72461075-72492212 protein_coding
ENSMUST00000185106 (Tex9-015) 72480240-72492089 retained_intron
ENSMUST00000185151 (Tex9-010) 72477838-72491939 protein_coding
ENSMUSG00000095555 (Gm28010)
predicted gene, 28010 		ENSMUST00000179485 (Gm28010-201) 72511209-72511334 miRNA
ENSMUSG00000096986 (4930509E16Rik)
RIKEN cDNA 4930509E16 gene 		ENSMUST00000181405 (4930509E16Rik-001) 72518250-72531858 lincRNA
ENSMUSG00000098275 (Gm18014)
predicted gene, 18014 		ENSMUST00000183369 (Gm18014-001) 72606381-72607197 processed_pseudogene
ENSMUSG00000098573 (Gm27232)
predicted gene 27232 		ENSMUST00000184373 (Gm27232-001) 72618693-72619520 antisense
ENSMUSG00000099310 (Gm19427)
predicted gene, 19427 		ENSMUST00000183619 (Gm19427-001) 72551728-72551935 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006I1_0001ENSDARG00000010586ENSDART00000024869ENSDARG00000077237ENSDART00000111303CIL_0006I1_0002ENSMUSG00000032221ENSMUST00000034746ENSMUST00000183809ENSMUST00000184604ENSMUSG00000037674ENSMUST00000093820ENSMUST00000163401ENSMUST00000183372ENSMUST00000183601ENSMUST00000184015ENSMUST00000184851ENSMUST00000185177ENSMUSG00000090626ENSMUST00000085358ENSMUST00000183399ENSMUST00000183428ENSMUST00000183501ENSMUST00000183551ENSMUST00000183574ENSMUST00000183856ENSMUST00000184066ENSMUST00000184125ENSMUST00000184312ENSMUST00000184557ENSMUST00000184624ENSMUST00000184734ENSMUST00000184831ENSMUST00000185106ENSMUST00000185151ENSMUSG00000095555ENSMUST00000179485ENSMUSG00000096986ENSMUST00000181405ENSMUSG00000098275ENSMUST00000183369ENSMUSG00000098573ENSMUST00000184373ENSMUSG00000099310ENSMUST00000183619
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006I1_0001ENSDARG00000010586ENSDART00000024869ENSDARG00000077237ENSDART00000111303CIL_0006I1_0002ENSMUSG00000032221ENSMUST00000034746ENSMUST00000183809ENSMUSG00000037674ENSMUST00000093820ENSMUST00000163401ENSMUSG00000090626ENSMUST00000085358ENSMUST00000183399ENSMUST00000183428ENSMUST00000183574ENSMUST00000183856ENSMUST00000184066ENSMUST00000184125ENSMUST00000184831ENSMUST00000185106ENSMUST00000185151ENSMUSG00000095555ENSMUST00000179485ENSMUSG00000096986ENSMUST00000181405ENSMUSG00000098275ENSMUST00000183369ENSMUSG00000098573ENSMUST00000184373ENSMUSG00000099310ENSMUST00000183619
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010586 ENSDART00000024869 N/A N/A N/A 1.668±0.17 N/A N/A 0.184±0.02 2.807±2.22 N/A N/A 2.566±0.00 N/A N/A N/A
ENSDARG00000077237 ENSDART00000111303 N/A N/A N/A 4.570±1.25 N/A N/A 1.590±0.53 1.920±0.95 0.072±0.00 N/A 2.917±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032221 ENSMUST00000034746 N/A N/A N/A 2.929±0.12 N/A N/A 0.104±0.00 N/A 7.640±7.39 0.907±0.14 N/A 7.705±4.91 2.368±2.26 99.453±148.53
ENSMUST00000183809 N/A N/A N/A N/A N/A N/A N/A N/A 27.532±2.47 N/A N/A 30.086±0.00 19.052±0.00 537.949±508.49
ENSMUST00000184604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037674 ENSMUST00000093820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.627±0.00 1.510±0.00 N/A N/A
ENSMUST00000163401 0.631±0.21 1.137±0.30 1.086±0.28 3.487±1.39 1.975±0.89 1.801±0.76 0.446±0.22 1.345±0.68 0.943±0.46 0.866±0.14 2.117±0.45 2.429±2.10 1.221±0.38 1.062±0.69
ENSMUST00000183372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090626 ENSMUST00000085358 0.199±0.00 0.467±0.18 1.005±0.04 4.391±1.55 0.558±0.09 0.934±0.14 0.115±0.00 0.542±0.12 2.688±2.89 0.755±0.10 0.158±0.03 2.005±0.88 0.488±0.27 N/A
ENSMUST00000183399 0.797±0.61 2.112±0.64 N/A 2.523±0.00 0.950±0.22 2.211±0.69 0.278±0.09 0.686±0.14 0.175±0.09 1.480±0.25 0.164±0.00 5.331±2.48 N/A N/A
ENSMUST00000183428 N/A N/A N/A 9.495±0.00 N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A 12.653±10.19 N/A
ENSMUST00000183501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.204±0.00 N/A
ENSMUST00000183856 N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A
ENSMUST00000184066 N/A 1.017±0.00 N/A N/A N/A 1.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184125 N/A N/A 0.849±0.00 N/A N/A N/A N/A N/A 0.132±0.00 0.462±0.00 0.230±0.05 N/A 0.833±0.03 N/A
ENSMUST00000184312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.308±0.00 N/A
ENSMUST00000185106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.733±0.00 N/A
ENSMUST00000185151 N/A 0.974±0.00 N/A N/A N/A N/A 0.670±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000095555 ENSMUST00000179485 N/A N/A 19.205±0.00 86.555±112.54 N/A N/A N/A N/A N/A N/A N/A 8.843±0.00 N/A 451.438±418.17
ENSMUSG00000096986 ENSMUST00000181405 N/A N/A 0.020±0.00 N/A 0.136±0.08 0.246±0.00 0.085±0.02 0.047±0.00 0.091±0.05 N/A 0.160±0.04 0.054±0.03 0.054±0.02 1.160±0.00
ENSMUSG00000098275 ENSMUST00000183369 0.133±0.04 0.156±0.06 0.033±0.02 0.381±0.04 0.256±0.09 0.290±0.14 0.065±0.02 0.177±0.08 0.083±0.05 0.133±0.05 0.085±0.00 0.335±0.15 0.092±0.02 0.078±0.02
ENSMUSG00000098573 ENSMUST00000184373 9.685±3.37 7.222±0.00 N/A N/A 14.029±4.72 10.478±2.04 3.864±0.29 8.963±1.82 5.005±1.07 9.816±0.31 N/A 15.229±3.69 N/A 9.037±0.84
ENSMUSG00000099310 ENSMUST00000183619 N/A N/A 0.227±0.00 0.966±0.42 N/A N/A N/A N/A 1.425±0.69 2.338±0.00 N/A 1.357±0.00 1.635±0.95 1.439±0.00

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