C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulatory factor X, 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163401 Rfx7-001 ENSMUSG00000037674 10090 + 9:72532240-72622829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000163401
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000163401 0.631±0.21 1.137±0.30 1.086±0.28 3.487±1.39 1.975±0.89 1.801±0.76 0.446±0.22 1.345±0.68 0.943±0.46 0.866±0.14 2.117±0.45 2.429±2.10 1.221±0.38 1.062±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006I1 CIL_0006I1_0002 CGP 9:72450394-72622937

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000559447 RFX7-001 protein_coding Homo_sapiens 0 6822
ENST00000559847 RFX7-002 nonsense_mediated_decay Homo_sapiens 0 5216
ENST00000560792 RFX7-004 protein_coding Homo_sapiens 0 492

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