C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006KD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168275-ENSG00000059588 CGP 9606 1:234373456-234479103
GeneTranscriptPositionBiotype
ENSG00000059588 (TARBP1)
TAR (HIV-1) RNA binding protein 1 		ENST00000040877 (TARBP1-001) 234391313-234479103 protein_coding
ENST00000462259 (TARBP1-003) 234391378-234406380 processed_transcript
ENST00000463793 (TARBP1-004) 234410404-234420814 processed_transcript
ENST00000468077 (TARBP1-005) 234398382-234405993 processed_transcript
ENST00000471918 (TARBP1-009) 234391598-234392724 processed_transcript
ENST00000481183 (TARBP1-006) 234400251-234410531 processed_transcript
ENST00000483404 (TARBP1-002) 234391339-234407955 processed_transcript
ENST00000484454 (TARBP1-007) 234398178-234400902 processed_transcript
ENST00000496673 (TARBP1-008) 234391410-234401216 processed_transcript
ENSG00000168275 (COA6)
cytochrome c oxidase assembly factor 6 homolog (S. cerevisiae) 		ENST00000366612 (COA6-003) 234373701-234384046 protein_coding
ENST00000366613 (COA6-002) 234373683-234384045 protein_coding
ENST00000366615 (COA6-001) 234373456-234384049 protein_coding
ENST00000619305 (COA6-201) 234373468-234384048 protein_coding
ENSG00000231663 (RP5-827C21.4)
 ENST00000451795 (RP5-827C21.4-001) 234372807-234373593 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0006KD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051671-ENSMUSG00000090290 CGP 10090 8:126422501-126475065
GeneTranscriptPositionBiotype
ENSMUSG00000051671 (Coa6)
cytochrome c oxidase assembly factor 6 		ENSMUST00000059093 (Coa6-201) 126422501-126425434 protein_coding
ENSMUSG00000090290 (Gm17296)
predicted gene, 17296 		ENSMUST00000170518 (Gm17296-201) 126426652-126475065 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KD_0001ENSG00000059588ENST00000040877ENST00000462259ENST00000463793ENST00000468077ENST00000471918ENST00000481183ENST00000483404ENST00000484454ENST00000496673ENSG00000168275ENST00000366612ENST00000366613ENST00000366615ENST00000619305ENSG00000231663ENST00000451795CIL_0006KD_0002ENSMUSG00000051671ENSMUST00000059093ENSMUSG00000090290ENSMUST00000170518
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KD_0001ENSG00000059588ENST00000040877ENST00000462259ENST00000483404ENST00000496673ENSG00000168275ENST00000366612ENST00000366613ENST00000366615ENST00000619305ENSG00000231663ENST00000451795CIL_0006KD_0002ENSMUSG00000051671ENSMUST00000059093ENSMUSG00000090290ENSMUST00000170518
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000059588 ENST00000040877 0.710±0.00 N/A 0.473±0.00 N/A 1.978±0.00 1.604±0.00 0.725±0.54 0.971±0.26 0.333±0.00 0.884±0.25 0.911±0.00 3.637±3.50 2.318±0.54 2.368±0.22
ENST00000462259 N/A 3.300±0.00 N/A N/A 1.777±0.00 N/A N/A 1.405±0.00 N/A N/A N/A 4.404±2.14 1.460±0.13 1.352±0.00
ENST00000463793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483404 N/A 2.008±0.00 N/A 0.962±0.00 N/A N/A N/A 0.339±0.15 0.216±0.00 1.003±0.30 N/A 2.171±0.75 N/A 2.678±2.08
ENST00000484454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496673 N/A N/A N/A N/A N/A N/A N/A 2.453±0.00 1.041±0.00 N/A 1.008±0.00 N/A N/A N/A
ENSG00000168275 ENST00000366612 N/A N/A 0.241±0.00 N/A N/A N/A N/A N/A 0.924±0.00 N/A N/A 0.250±0.00 N/A N/A
ENST00000366613 1.989±0.00 2.889±0.00 1.798±0.00 2.754±0.37 2.029±0.00 N/A 2.232±1.60 4.994±0.64 N/A 2.121±0.00 5.333±0.00 1.089±0.00 1.976±0.00 3.361±0.00
ENST00000366615 N/A 6.967±0.00 N/A 3.625±0.00 N/A N/A 2.893±0.00 N/A 2.923±0.00 N/A N/A 4.670±0.59 4.365±2.30 N/A
ENST00000619305 6.714±0.00 N/A N/A 6.684±2.94 7.411±5.24 11.258±8.51 4.529±2.72 19.764±0.00 8.857±0.00 7.133±0.00 9.424±3.88 9.847±7.32 8.527±3.69 8.618±5.51
ENSG00000231663 ENST00000451795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.125±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000051671 ENSMUST00000059093 21.170±2.94 49.006±24.12 16.242±2.33 15.133±6.66 37.822±18.00 50.789±3.66 10.378±4.76 66.508±17.18 29.001±14.05 30.564±8.40 11.235±1.00 29.449±18.68 12.406±4.63 4.747±2.57
ENSMUSG00000090290 ENSMUST00000170518 N/A 2.439±0.65 N/A 0.277±0.00 1.617±0.00 1.892±1.32 1.180±0.00 1.878±0.00 0.454±0.07 N/A 1.364±0.55 2.482±1.10 0.481±0.10 0.069±0.02

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