C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006KP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000053020-ENSDARG00000053012 CGP 7955 10:6191318-6234473
GeneTranscriptPositionBiotype
ENSDARG00000053012 (ubxn8)
UBX domain protein 8 		ENSDART00000074971 (ubxn8-001) 6221831-6234473 protein_coding
ENSDART00000137462 (ubxn8-002) 6222221-6234456 retained_intron
ENSDARG00000053020 (ppp2cb)
protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform 		ENSDART00000062146 (ppp2cb-001) 6191318-6215881 protein_coding
ENSDART00000145495 (ppp2cb-002) 6191329-6205360 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006KP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000009630-ENSMUSG00000052906 CGP 10090 8:33599621-33641976
GeneTranscriptPositionBiotype
ENSMUSG00000009630 (Ppp2cb)
protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform 		ENSMUST00000009774 (Ppp2cb-201) 33599621-33619794 protein_coding
ENSMUSG00000052906 (Ubxn8)
UBX domain protein 8 		ENSMUST00000095349 (Ubxn8-201) 33619586-33641976 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KP_0001ENSDARG00000053012ENSDART00000074971ENSDART00000137462ENSDARG00000053020ENSDART00000062146ENSDART00000145495CIL_0006KP_0002ENSMUSG00000009630ENSMUST00000009774ENSMUSG00000052906ENSMUST00000095349
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KP_0001ENSDARG00000053012ENSDART00000074971ENSDART00000137462ENSDARG00000053020ENSDART00000062146ENSDART00000145495CIL_0006KP_0002ENSMUSG00000009630ENSMUST00000009774ENSMUSG00000052906ENSMUST00000095349
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053012 ENSDART00000074971 N/A N/A N/A 1.161±0.31 N/A N/A 1.527±0.24 0.679±0.28 0.286±0.00 N/A 0.436±0.00 N/A N/A N/A
ENSDART00000137462 N/A N/A N/A 1.676±0.75 N/A N/A 0.778±0.00 0.895±0.00 N/A N/A 1.009±0.00 N/A N/A N/A
ENSDARG00000053020 ENSDART00000062146 N/A N/A N/A 74.913±50.00 N/A N/A 41.908±27.42 33.883±14.57 8.256±0.00 N/A 20.944±0.00 N/A N/A N/A
ENSDART00000145495 N/A N/A N/A N/A N/A N/A N/A N/A 4.400±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009630 ENSMUST00000009774 39.128±4.28 13.743±1.72 40.385±0.74 58.567±15.05 27.072±16.51 25.062±12.45 21.794±2.86 33.131±2.53 15.367±4.08 53.139±10.99 13.144±3.22 27.331±8.85 38.431±16.44 49.133±9.28
ENSMUSG00000052906 ENSMUST00000095349 4.284±0.13 8.791±0.71 5.338±0.22 5.463±0.00 3.348±0.46 4.295±0.11 1.824±0.07 6.741±0.71 5.709±1.55 4.281±0.00 1.335±0.15 4.584±1.30 10.818±2.25 15.104±3.60

Loading