C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009774 Ppp2cb-201 ENSMUSG00000009630 10090 + 8:33599621-33619794 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009774
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009774 39.128±4.28 13.743±1.72 40.385±0.74 58.567±15.05 27.072±16.51 25.062±12.45 21.794±2.86 33.131±2.53 15.367±4.08 53.139±10.99 13.144±3.22 27.331±8.85 38.431±16.44 49.133±9.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QA CIL_0001QA_0002 CGP 8:33516738-33619794
CIL_0006KP CIL_0006KP_0002 CGP 8:33599621-33641976

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000159 IDA protein phosphatase type 2A complex
GO:0000775 IEA chromosome, centromeric region
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0004722 IEA protein serine/threonine phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006470 IEA protein dephosphorylation
GO:0008022 IEA protein C-terminus binding
GO:0008637 IMP apoptotic mitochondrial changes
GO:0010468 IMP regulation of gene expression
GO:0034976 IMP response to endoplasmic reticulum stress
GO:0042542 IMP response to hydrogen peroxide
GO:0043161 IMP proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046580 IEA negative regulation of Ras protein signal transduction
GO:0046677 IMP response to antibiotic
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221138 PPP2CB-001 protein_coding Homo_sapiens 0 1834
ENST00000518243 PPP2CB-008 protein_coding Homo_sapiens 0 669
ENST00000518532 PPP2CB-003 retained_intron Homo_sapiens 0 374
ENST00000518564 PPP2CB-002 protein_coding Homo_sapiens 0 370
ENST00000520056 PPP2CB-010 protein_coding Homo_sapiens 0 625
ENST00000520334 PPP2CB-004 protein_coding Homo_sapiens 0 525
ENST00000522113 PPP2CB-006 processed_transcript Homo_sapiens 0 187
ENST00000523023 PPP2CB-009 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000523804 PPP2CB-005 retained_intron Homo_sapiens 0 363
ENST00000567043 AC002519.6-001 transcribed_processed_pseudogene Homo_sapiens 0 944

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