C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006PL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134757-ENSG00000046604 CGP 9606 18:31447795-31549008
GeneTranscriptPositionBiotype
ENSG00000046604 (DSG2)
desmoglein 2
ENST00000261590 (DSG2-001) 31498043-31549008 protein_coding
ENST00000585206 (DSG2-002) 31498220-31522608 protein_coding
ENSG00000134757 (DSG3)
desmoglein 3
ENST00000257189 (DSG3-001) 31447795-31478702 protein_coding
ENSG00000266521 (RP11-650P15.1)
ENST00000580937 (RP11-650P15.1-001) 31496645-31497195 lincRNA
CIL_0006PL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056632-ENSMUSG00000044393 CGP 10090 18:20510304-20604521
GeneTranscriptPositionBiotype
ENSMUSG00000044393 (Dsg2)
desmoglein 2
ENSMUST00000059787 (Dsg2-001) 20558074-20604521 protein_coding
ENSMUST00000120102 (Dsg2-002) 20558155-20585553 protein_coding
ENSMUST00000121837 (Dsg2-003) 20558246-20582916 protein_coding
ENSMUSG00000056632 (Dsg3)
desmoglein 3
ENSMUST00000070892 (Dsg3-201) 20510304-20541310 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PL_0001ENSG00000046604ENST00000261590ENST00000585206ENSG00000134757ENST00000257189ENSG00000266521ENST00000580937CIL_0006PL_0002ENSMUSG00000044393ENSMUST00000059787ENSMUST00000120102ENSMUST00000121837ENSMUSG00000056632ENSMUST00000070892
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PL_0001ENSG00000046604ENST00000261590ENSG00000134757ENST00000257189ENSG00000266521ENST00000580937CIL_0006PL_0002ENSMUSG00000044393ENSMUST00000059787ENSMUST00000120102ENSMUST00000121837ENSMUSG00000056632ENSMUST00000070892
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000046604 ENST00000261590 20.011±0.00 1.454±0.00 8.273±0.00 0.146±0.02 12.765±4.29 17.472±9.55 6.745±3.74 7.652±5.42 3.680±1.31 3.996±0.01 0.322±0.02 13.042±6.61 11.915±3.20 1.735±0.07
ENST00000585206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000134757 ENST00000257189 0.138±0.00 0.032±0.00 0.072±0.00 0.076±0.06 0.529±0.01 0.011±0.00 0.006±0.00 0.035±0.02 0.085±0.04 0.096±0.01 0.007±0.00 6.222±5.15 0.260±0.14 0.089±0.04
ENSG00000266521 ENST00000580937 N/A N/A N/A 0.103±0.00 N/A N/A 0.161±0.00 0.141±0.00 N/A N/A N/A 0.233±0.00 0.148±0.00 0.062±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044393 ENSMUST00000059787 2.552±0.51 0.925±0.37 11.380±0.66 N/A 3.302±1.19 48.745±3.00 11.902±1.34 2.443±0.38 N/A 1.833±0.28 0.033±0.03 3.479±0.55 32.113±2.87 0.133±0.09
ENSMUST00000120102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00
ENSMUST00000121837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 62.276±0.00 0.397±0.00
ENSMUSG00000056632 ENSMUST00000070892 0.038±0.02 N/A 0.032±0.00 N/A 0.389±0.22 0.023±0.00 0.007±0.00 N/A 0.004±0.00 N/A 0.016±0.01 0.143±0.08 0.073±0.10 0.013±0.00

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