C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006PP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000080007-ENSG00000164430 CGP 9606 6:73394748-73452276
GeneTranscriptPositionBiotype
ENSG00000080007 (DDX43)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
ENST00000370336 (DDX43-001) 73394748-73417569 protein_coding
ENST00000464221 (DDX43-003) 73394894-73397994 retained_intron
ENST00000479773 (DDX43-002) 73406965-73414007 processed_transcript
ENSG00000164430 (MB21D1)
Mab-21 domain containing 1
ENST00000370315 (MB21D1-002) 73423709-73452276 protein_coding
ENST00000370318 (MB21D1-001) 73413515-73452259 protein_coding
ENST00000459924 (MB21D1-003) 73439743-73445685 retained_intron
ENSG00000266346 (AC019205.2)
ENST00000583935 (AC019205.2-201) 73432984-73433084 miRNA
CIL_0006PP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070291-ENSMUSG00000032344 CGP 10090 9:78395777-78443237
GeneTranscriptPositionBiotype
ENSMUSG00000032344 (Mb21d1)
Mab-21 domain containing 1
ENSMUST00000034898 (Mb21d1-002) 78431337-78443237 protein_coding
ENSMUST00000070742 (Mb21d1-001) 78430526-78443204 protein_coding
ENSMUST00000127190 (Mb21d1-003) 78431789-78442885 nonsense_mediated_decay
ENSMUSG00000070291 (Ddx43)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
ENSMUST00000113367 (Ddx43-001) 78395777-78423587 protein_coding
ENSMUSG00000087052 (Gm8093)
predicted gene 8093
ENSMUST00000128935 (Gm8093-003) 78427507-78429398 transcribed_processed_pseudogene
ENSMUST00000129983 (Gm8093-001) 78427894-78429972 processed_transcript
ENSMUST00000144982 (Gm8093-002) 78428445-78430805 processed_transcript
ENSMUSG00000090724 (4930542C12Rik)
RIKEN cDNA 4930542C12 gene
ENSMUST00000171096 (4930542C12Rik-001) 78394956-78396158 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PP_0001ENSG00000080007ENST00000370336ENST00000464221ENST00000479773ENSG00000164430ENST00000370315ENST00000370318ENST00000459924ENSG00000266346ENST00000583935CIL_0006PP_0002ENSMUSG00000032344ENSMUST00000034898ENSMUST00000070742ENSMUST00000127190ENSMUSG00000070291ENSMUST00000113367ENSMUSG00000087052ENSMUST00000128935ENSMUST00000129983ENSMUST00000144982ENSMUSG00000090724ENSMUST00000171096
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PP_0001ENSG00000080007ENST00000370336ENST00000464221ENST00000479773ENSG00000164430ENST00000370315ENST00000370318ENST00000459924ENSG00000266346ENST00000583935CIL_0006PP_0002ENSMUSG00000032344ENSMUST00000034898ENSMUST00000070742ENSMUST00000127190ENSMUSG00000070291ENSMUST00000113367ENSMUSG00000087052ENSMUST00000128935ENSMUST00000129983ENSMUST00000144982ENSMUSG00000090724ENSMUST00000171096
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080007 ENST00000370336 0.290±0.00 1.075±0.00 0.015±0.00 0.028±0.00 N/A N/A 0.103±0.00 0.109±0.00 0.182±0.11 0.423±0.00 0.090±0.00 N/A 1.074±0.41 12.525±0.51
ENST00000464221 N/A N/A N/A N/A N/A N/A N/A N/A 0.816±0.00 N/A N/A N/A N/A N/A
ENST00000479773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A N/A N/A
ENSG00000164430 ENST00000370315 0.560±0.00 2.975±0.00 0.119±0.00 0.234±0.17 1.612±0.39 1.116±0.69 0.257±0.17 0.496±0.41 0.303±0.11 1.983±0.92 0.250±0.00 2.615±1.59 0.758±0.12 N/A
ENST00000370318 0.461±0.00 N/A N/A 0.070±0.00 N/A 0.328±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459924 N/A N/A N/A 0.170±0.00 N/A 0.621±0.00 0.163±0.00 0.559±0.00 0.722±0.00 N/A N/A N/A N/A N/A
ENSG00000266346 ENST00000583935 0.904±0.00 2.914±0.00 N/A 2.557±0.00 0.709±0.00 1.568±0.00 1.288±0.00 1.407±0.00 0.650±0.00 3.678±0.00 N/A 35.555±34.87 0.705±0.00 1.789±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032344 ENSMUST00000034898 0.368±0.05 0.712±0.18 N/A N/A 0.666±0.34 0.508±0.29 0.100±0.00 0.154±0.08 0.190±0.15 0.315±0.26 0.064±0.04 0.800±0.50 0.150±0.07 N/A
ENSMUST00000070742 0.879±0.00 0.230±0.05 0.584±0.05 0.195±0.02 0.391±0.15 0.524±0.26 0.132±0.03 0.130±0.08 0.613±0.41 0.341±0.12 0.042±0.01 0.578±0.37 0.204±0.08 1.149±0.00
ENSMUST00000127190 0.116±0.00 N/A N/A N/A 0.170±0.00 0.285±0.04 0.096±0.02 0.131±0.00 0.063±0.01 0.422±0.00 0.064±0.00 0.270±0.10 0.052±0.00 N/A
ENSMUSG00000070291 ENSMUST00000113367 0.077±0.00 0.130±0.05 N/A 0.112±0.02 0.238±0.15 0.399±0.22 0.021±0.00 0.025±0.00 0.022±0.01 0.080±0.05 0.014±0.00 0.156±0.13 0.162±0.06 4.137±1.98
ENSMUSG00000087052 ENSMUST00000128935 N/A N/A N/A N/A 0.105±0.00 0.101±0.00 N/A 0.037±0.00 0.030±0.01 N/A N/A N/A N/A 1.589±0.40
ENSMUST00000129983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.819±1.55
ENSMUST00000144982 N/A N/A N/A 0.093±0.00 N/A N/A 0.083±0.00 N/A N/A N/A N/A 0.238±0.00 N/A 11.007±0.00
ENSMUSG00000090724 ENSMUST00000171096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.473±0.59

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