C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Mab-21 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370315 MB21D1-002 ENSG00000164430 9606 - 6:73423709-73452276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000370315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000370315 0.560±0.00 2.975±0.00 0.119±0.00 0.234±0.17 1.612±0.39 1.116±0.69 0.257±0.17 0.496±0.41 0.303±0.11 1.983±0.92 0.250±0.00 2.615±1.59 0.758±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PM CIL_0006PM_0001 CGP 6:73368555-73417569
CIL_0006PP CIL_0006PP_0001 CGP 6:73394748-73452276

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002218 IMP activation of innate immune response
GO:0002230 IMP positive regulation of defense response to virus by host
GO:0003677 IDA DNA binding
GO:0005524 IEA ATP binding
GO:0005525 IEA GTP binding
GO:0005829 IDA cytosol
GO:0009190 IDA cyclic nucleotide biosynthetic process
GO:0032481 TAS positive regulation of type I interferon production
GO:0045087 TAS innate immune response
GO:0046872 IEA metal ion binding
GO:0051607 IEA defense response to virus
GO:0061501 IDA cyclic-GMP-AMP synthase activity
GO:0071360 IDA cellular response to exogenous dsRNA

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070742 Mb21d1-001 protein_coding Mus_musculus 0 712
ENSMUST00000034898 Mb21d1-002 protein_coding Mus_musculus 0 473
ENSMUST00000127190 Mb21d1-003 nonsense_mediated_decay Mus_musculus 0 272
ENSMUST00000156568 Qtrtd1-002 retained_intron Mus_musculus 0.00000003 66

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