C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006SW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104324-ENSG00000180543 CGP 9606 8:96645227-97277964
GeneTranscriptPositionBiotype
ENSG00000104324 (CPQ)
carboxypeptidase Q 		ENST00000220763 (CPQ-001) 96645227-97143501 protein_coding
ENST00000517742 (CPQ-006) 96645375-96835097 protein_coding
ENST00000519484 (CPQ-003) 96760974-96785310 protein_coding
ENST00000519900 (CPQ-005) 96645371-96785292 protein_coding
ENST00000521142 (CPQ-004) 96761240-96785287 protein_coding
ENST00000522617 (CPQ-007) 97029469-97149654 protein_coding
ENST00000525310 (CPQ-010) 96732292-96785328 processed_transcript
ENST00000529551 (CPQ-008) 97055527-97092936 processed_transcript
ENST00000532528 (CPQ-009) 97055527-97092710 processed_transcript
ENST00000621294 (CPQ-201) 96784874-97143501 protein_coding
ENSG00000180543 (TSPYL5)
TSPY-like 5 		ENST00000322128 (TSPYL5-001) 97273474-97277964 protein_coding
ENSG00000260640 (KB-1000E4.2)
 ENST00000569849 (KB-1000E4.2-001) 97241742-97242204 lincRNA
ENSG00000270077 (KB-1958F4.1)
 ENST00000602771 (KB-1958F4.1-001) 97144170-97144723 sense_intronic
ENSG00000272249 (KB-1958F4.2)
 ENST00000606010 (KB-1958F4.2-001) 97132835-97133379 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0006SW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039007-ENSMUSG00000038984 CGP 10090 15:33083129-33687883
GeneTranscriptPositionBiotype
ENSMUSG00000038984 (Tspyl5)
testis-specific protein, Y-encoded-like 5 		ENSMUST00000042021 (Tspyl5-201) 33683876-33687883 protein_coding
ENSMUSG00000039007 (Cpq)
carboxypeptidase Q 		ENSMUST00000042167 (Cpq-201) 33083129-33594552 protein_coding
ENSMUSG00000058101 (1700084J12Rik)
RIKEN cDNA 1700084J12 gene 		ENSMUST00000079057 (1700084J12Rik-001) 33405206-33405939 transcribed_processed_pseudogene
ENSMUST00000187707 (1700084J12Rik-002) 33403985-33405976 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SW_0001ENSG00000104324ENST00000220763ENST00000517742ENST00000519484ENST00000519900ENST00000521142ENST00000522617ENST00000525310ENST00000529551ENST00000532528ENST00000621294ENSG00000180543ENST00000322128ENSG00000260640ENST00000569849ENSG00000270077ENST00000602771ENSG00000272249ENST00000606010CIL_0006SW_0002ENSMUSG00000038984ENSMUST00000042021ENSMUSG00000039007ENSMUST00000042167ENSMUSG00000058101ENSMUST00000079057ENSMUST00000187707
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SW_0001ENSG00000104324ENST00000220763ENST00000517742ENST00000621294ENSG00000180543ENST00000322128ENSG00000260640ENST00000569849ENSG00000270077ENST00000602771ENSG00000272249ENST00000606010CIL_0006SW_0002ENSMUSG00000038984ENSMUST00000042021ENSMUSG00000039007ENSMUST00000042167ENSMUSG00000058101ENSMUST00000079057ENSMUST00000187707
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104324 ENST00000220763 3.863±0.00 2.865±0.00 N/A 3.054±0.00 4.723±2.08 6.018±0.00 9.555±0.00 5.745±0.00 3.249±0.80 8.977±0.00 1.605±0.00 14.111±9.93 6.440±2.08 7.872±0.00
ENST00000517742 N/A N/A N/A N/A 3.364±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621294 14.239±0.00 15.724±0.00 6.421±0.00 4.972±2.05 9.938±6.71 15.175±7.99 2.429±0.31 14.537±5.06 8.563±1.35 11.354±3.65 2.223±0.17 28.152±26.49 21.814±5.63 15.071±6.15
ENSG00000180543 ENST00000322128 2.648±0.00 5.028±0.00 1.067±0.00 7.148±2.75 3.971±2.13 2.596±1.46 3.168±1.74 4.043±3.73 2.148±1.39 1.978±0.36 1.615±0.41 7.712±7.53 2.189±0.27 27.674±9.43
ENSG00000260640 ENST00000569849 N/A N/A 0.178±0.00 0.338±0.00 0.133±0.00 N/A 0.088±0.00 N/A 1.211±0.00 0.021±0.00 N/A 0.076±0.00 N/A 0.072±0.00
ENSG00000270077 ENST00000602771 0.016±0.00 0.139±0.00 N/A 0.144±0.00 0.246±0.02 0.516±0.34 0.106±0.00 N/A 0.933±0.00 0.048±0.01 N/A 0.235±0.18 0.172±0.00 0.143±0.01
ENSG00000272249 ENST00000606010 N/A 0.095±0.00 N/A 0.032±0.00 N/A N/A N/A N/A 0.181±0.00 N/A N/A 0.698±0.90 N/A 0.165±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038984 ENSMUST00000042021 1.051±0.53 1.590±0.24 1.398±0.15 4.721±0.69 0.446±0.09 0.431±0.05 1.266±0.05 0.902±0.09 0.145±0.14 0.715±0.07 0.151±0.03 2.174±0.71 0.138±0.12 3.502±1.54
ENSMUSG00000039007 ENSMUST00000042167 40.102±7.37 21.273±1.45 39.872±8.47 2.518±1.59 23.962±7.01 22.481±3.02 16.157±4.41 24.352±6.72 23.222±11.44 27.197±3.07 5.148±0.55 24.906±5.98 2.899±2.90 9.465±3.94
ENSMUSG00000058101 ENSMUST00000079057 0.061±0.02 0.191±0.00 N/A 0.023±0.00 0.243±0.03 0.110±0.06 0.192±0.00 0.106±0.04 0.028±0.01 0.085±0.00 N/A 0.034±0.00 0.067±0.01 0.612±0.18
ENSMUST00000187707 0.090±0.07 0.146±0.00 N/A 0.031±0.02 0.027±0.00 N/A 0.110±0.00 0.039±0.00 0.043±0.04 0.034±0.00 N/A 0.012±0.00 0.016±0.01 0.523±0.25

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