C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700084J12 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079057 1700084J12Rik-001 ENSMUSG00000058101 10090 - 15:33405206-33405939 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000079057
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000079057 0.061±0.02 0.191±0.00 0.023±0.00 0.243±0.03 0.110±0.06 0.192±0.00 0.106±0.04 0.028±0.01 0.085±0.00 0.034±0.00 0.067±0.01 0.612±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SV CIL_0006SV_0002 CGP 15:32920723-33594552
CIL_0006SW CIL_0006SW_0002 CGP 15:33083129-33687883

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304734 RPL7L1-001 protein_coding Homo_sapiens 0 647
ENST00000397415 RPL7L1-002 processed_transcript Homo_sapiens 0 514
ENST00000405921 RP1-290I10.2-001 processed_pseudogene Homo_sapiens 0 401
ENST00000423238 RPL7P57-001 processed_pseudogene Homo_sapiens 0 547
ENST00000425129 RPL7P46-001 processed_pseudogene Homo_sapiens 0 579
ENST00000431298 RPL7L1P9-001 processed_pseudogene Homo_sapiens 0 518
ENST00000437739 RPL7P28-001 processed_pseudogene Homo_sapiens 0 497
ENST00000446092 RPL7L1P11-001 processed_pseudogene Homo_sapiens 0 545
ENST00000446889 RPL7L1P2-001 processed_pseudogene Homo_sapiens 0 464
ENST00000449851 RPL7P14-001 processed_pseudogene Homo_sapiens 0 520
ENST00000455249 RPL7L1P3-001 processed_pseudogene Homo_sapiens 0 244
ENST00000462348 RPL7L1-008 processed_transcript Homo_sapiens 0 302
ENST00000466005 RPL7P22-001 processed_pseudogene Homo_sapiens 0 569
ENST00000469911 RPL7L1P8-001 processed_pseudogene Homo_sapiens 0 507
ENST00000470927 RPL7P17-001 processed_pseudogene Homo_sapiens 0 531
ENST00000478287 RPL7P21-001 processed_pseudogene Homo_sapiens 0 492
ENST00000483998 RPL7L1-005 processed_transcript Homo_sapiens 0 514
ENST00000492836 RPL7L1-007 processed_transcript Homo_sapiens 8e-31 137
ENST00000493763 RPL7L1-003 protein_coding Homo_sapiens 0 647
ENST00000497417 RPL7L1-004 retained_intron Homo_sapiens 2e-33 148
ENST00000509986 RPL7L1P7-001 processed_pseudogene Homo_sapiens 0 359
ENST00000511702 RPL7L1P13-001 processed_pseudogene Homo_sapiens 0 484
ENST00000511857 RP11-15B17.2-001 processed_pseudogene Homo_sapiens 0 553
ENST00000513004 RPL7L1P4-001 processed_pseudogene Homo_sapiens 0 390
ENST00000530523 RP11-412B14.2-001 processed_pseudogene Homo_sapiens 0 370
ENST00000560719 RP11-621H8.1-001 processed_pseudogene Homo_sapiens 0 361
ENST00000569728 AC002310.10-001 unprocessed_pseudogene Homo_sapiens 0 442
ENST00000572039 RP11-433P17.1-001 processed_pseudogene Homo_sapiens 0 518
ENST00000590816 RPL7L1P5-001 processed_pseudogene Homo_sapiens 0 496
ENST00000602561 RPL7L1-010 protein_coding Homo_sapiens 0 442

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