C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006VV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000011801-ENSDARG00000027992 CGP 7955 9:22105704-22197962
GeneTranscriptPositionBiotype
ENSDARG00000011801 (wars2)
tryptophanyl tRNA synthetase 2, mitochondrial 		ENSDART00000018570 (wars2-001) 22105704-22131758 protein_coding
ENSDARG00000027992 (hao2)
hydroxyacid oxidase 2 (long chain) 		ENSDART00000035428 (hao2-001) 22181663-22197962 protein_coding
ENSDART00000122139 (hao2-201) 22181589-22197962 protein_coding
ENSDART00000133903 (hao2-003) 22184483-22188183 protein_coding
ENSDART00000136365 (hao2-002) 22180207-22194117 protein_coding
ENSDARG00000087754 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000119752 (5S_rRNA.1626-201) 22146034-22146148 rRNA
CIL_0006VV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116874-ENSG00000116882 CGP 9606 1:119031216-119394130
GeneTranscriptPositionBiotype
ENSG00000116874 (WARS2)
tryptophanyl tRNA synthetase 2, mitochondrial 		ENST00000235521 (WARS2-001) 119031221-119140671 protein_coding
ENST00000369426 (WARS2-002) 119031216-119140648 protein_coding
ENST00000495746 (WARS2-005) 119033297-119140654 processed_transcript
ENST00000497402 (WARS2-004) 119034129-119082541 processed_transcript
ENST00000497761 (WARS2-003) 119139648-119140638 processed_transcript
ENSG00000116882 (HAO2)
hydroxyacid oxidase 2 (long chain) 		ENST00000325945 (HAO2-002) 119368838-119394128 protein_coding
ENST00000361035 (HAO2-001) 119368809-119394130 protein_coding
ENST00000457318 (HAO2-003) 119368779-119386694 protein_coding
ENST00000482991 (HAO2-004) 119392439-119394114 processed_transcript
ENST00000622548 (HAO2-201) 119368779-119394128 protein_coding
ENSG00000194297 (RNU1-75P)
RNA, U1 small nuclear 75, pseudogene 		ENST00000347264 (RNU1-75P-201) 119331397-119331525 snRNA
ENSG00000223575 (RBMX2P3)
RNA binding motif protein, X-linked 2 pseudogene 3 		ENST00000450122 (RBMX2P3-001) 119084998-119085954 processed_pseudogene
ENSG00000224238 (WARS2-IT1)
WARS2 intronic transcript 1 (non-protein coding) 		ENST00000423984 (WARS2-IT1-001) 119047405-119064785 antisense
ENSG00000227056 (RPL6P2)
ribosomal protein L6 pseudogene 2 		ENST00000425480 (RPL6P2-001) 119219314-119220096 processed_pseudogene
ENSG00000227712 (RP11-418J17.3)
 ENST00000457719 (RP11-418J17.3-001) 119260265-119327303 lincRNA
ENSG00000230921 (HAO2-IT1)
HAO2 intronic transcript 1 (non-protein coding) 		ENST00000419144 (HAO2-IT1-001) 119368946-119370331 sense_intronic
ENSG00000232650 (RP5-834N19.1)
 ENST00000420059 (RP5-834N19.1-002) 119328176-119330815 lincRNA
ENST00000457683 (RP5-834N19.1-001) 119328252-119356182 lincRNA
ENSG00000236804 (RPS3AP12)
ribosomal protein S3a pseudogene 12 		ENST00000443616 (RPS3AP12-001) 119126539-119127291 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VV_0001ENSDARG00000011801ENSDART00000018570ENSDARG00000027992ENSDART00000035428ENSDART00000122139ENSDART00000133903ENSDART00000136365ENSDARG00000087754ENSDART00000119752CIL_0006VV_0002ENSG00000116874ENST00000235521ENST00000369426ENST00000495746ENST00000497402ENST00000497761ENSG00000116882ENST00000325945ENST00000361035ENST00000457318ENST00000482991ENST00000622548ENSG00000194297ENST00000347264ENSG00000223575ENST00000450122ENSG00000224238ENST00000423984ENSG00000227056ENST00000425480ENSG00000227712ENST00000457719ENSG00000230921ENST00000419144ENSG00000232650ENST00000420059ENST00000457683ENSG00000236804ENST00000443616
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VV_0001ENSDARG00000011801ENSDART00000018570ENSDARG00000027992ENSDART00000035428ENSDART00000122139ENSDART00000133903ENSDART00000136365ENSDARG00000087754ENSDART00000119752CIL_0006VV_0002ENSG00000116874ENST00000235521ENST00000369426ENST00000497761ENSG00000116882ENST00000325945ENST00000361035ENST00000457318ENST00000622548ENSG00000194297ENST00000347264ENSG00000223575ENST00000450122ENSG00000224238ENST00000423984ENSG00000227056ENST00000425480ENSG00000227712ENST00000457719ENSG00000230921ENST00000419144ENSG00000232650ENST00000420059ENST00000457683ENSG00000236804ENST00000443616
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011801 ENSDART00000018570 N/A N/A N/A 1.730±1.14 N/A N/A 4.151±4.26 2.296±0.00 0.391±0.00 N/A 0.395±0.00 N/A N/A N/A
ENSDARG00000027992 ENSDART00000035428 N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000122139 N/A N/A N/A 0.105±0.03 N/A N/A 1.350±0.93 23.984±5.51 1.126±0.00 N/A 0.126±0.00 N/A N/A N/A
ENSDART00000133903 N/A N/A N/A N/A N/A N/A N/A N/A 0.795±0.00 N/A N/A N/A N/A N/A
ENSDART00000136365 N/A N/A N/A 0.111±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000087754 ENSDART00000119752 N/A N/A N/A 7.488±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116874 ENST00000235521 3.195±0.00 1.318±0.00 1.548±0.00 1.632±0.14 2.352±1.00 1.927±0.13 1.417±0.81 2.462±1.46 2.126±0.14 2.067±0.18 1.916±0.00 2.791±1.03 3.087±0.57 2.359±0.09
ENST00000369426 N/A 0.882±0.00 N/A N/A N/A 1.342±0.00 N/A N/A N/A N/A 1.496±0.00 0.996±0.00 0.792±0.00 N/A
ENST00000495746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497761 N/A N/A N/A 2.894±0.00 3.617±0.00 5.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000116882 ENST00000325945 N/A N/A N/A N/A N/A N/A N/A 2.053±0.00 44.593±0.00 N/A N/A 0.028±0.00 N/A 0.088±0.00
ENST00000361035 N/A N/A 4.464±0.00 N/A 0.178±0.00 0.146±0.00 0.060±0.00 4.444±3.56 38.798±0.00 N/A N/A 0.041±0.00 N/A 0.037±0.00
ENST00000457318 N/A N/A N/A N/A N/A 0.191±0.00 N/A N/A N/A N/A N/A 0.034±0.00 0.050±0.00 N/A
ENST00000482991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622548 N/A N/A 8.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000194297 ENST00000347264 N/A N/A N/A N/A N/A N/A N/A 8.972±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000223575 ENST00000450122 0.032±0.00 N/A 0.083±0.00 0.036±0.00 0.020±0.00 0.128±0.03 0.017±0.00 N/A N/A 0.377±0.00 N/A 0.157±0.03 0.206±0.00 0.043±0.00
ENSG00000224238 ENST00000423984 0.400±0.00 1.011±0.00 0.140±0.00 0.492±0.46 0.887±0.00 0.273±0.10 0.321±0.23 0.738±0.00 0.153±0.00 0.209±0.16 0.244±0.00 0.563±0.27 0.428±0.35 1.354±0.41
ENSG00000227056 ENST00000425480 N/A 0.036±0.00 1.212±0.00 N/A 0.292±0.00 0.092±0.04 0.054±0.03 0.433±0.00 0.544±0.00 0.025±0.01 0.031±0.00 0.133±0.11 N/A 0.040±0.01
ENSG00000227712 ENST00000457719 N/A 0.104±0.00 N/A 0.087±0.00 0.052±0.00 N/A N/A 0.668±0.00 0.161±0.00 N/A N/A N/A N/A N/A
ENSG00000230921 ENST00000419144 N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A
ENSG00000232650 ENST00000420059 N/A N/A N/A N/A N/A N/A N/A 0.804±0.57 0.048±0.00 N/A N/A N/A 0.065±0.00 0.080±0.00
ENST00000457683 N/A 0.033±0.00 0.764±0.00 0.033±0.00 0.033±0.00 N/A 0.031±0.00 N/A 0.064±0.00 N/A N/A 0.072±0.00 0.042±0.00 N/A
ENSG00000236804 ENST00000443616 0.045±0.00 0.155±0.00 0.693±0.00 0.060±0.00 0.262±0.25 0.234±0.16 0.108±0.05 0.030±0.00 0.121±0.07 0.099±0.00 N/A 0.028±0.01 N/A 0.063±0.02

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