C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tryptophanyl tRNA synthetase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000235521 WARS2-001 ENSG00000116874 9606 - 1:119031221-119140671 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000235521
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000235521 3.195±0.00 1.318±0.00 1.548±0.00 1.632±0.14 2.352±1.00 1.927±0.13 1.417±0.81 2.462±1.46 2.126±0.14 2.067±0.18 1.916±0.00 2.791±1.03 3.087±0.57 2.359±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CA CIL_0008CA_0001 VISTA 1:118609935-119210971
CIL_0008QB CIL_0008QB_0001 VISTA 1:118677867-119281745
CIL_0007RV CIL_0007RV_0001 VISTA 1:118706148-119314384
CIL_00012O CIL_00012O_0002 CGP 1:118883046-119140671
CIL_0006VV CIL_0006VV_0002 CGP 1:119031216-119394130

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001570 IEA vasculogenesis
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004830 IEA tryptophan-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006436 IEA tryptophanyl-tRNA aminoacylation
GO:0010467 TAS gene expression

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004343 Wars2-001 protein_coding Mus_musculus 0 1168
ENSMUST00000135960 Wars2-002 processed_transcript Mus_musculus 0 580

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