C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000753_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000007001-ENSG00000153237 CGP 9606 2:157876702-158456753
GeneTranscriptPositionBiotype
ENSG00000007001 (UPP2)
uridine phosphorylase 2 		ENST00000005756 (UPP2-001) 158101870-158135966 protein_coding
ENST00000460456 (UPP2-004) 158101868-158135227 processed_transcript
ENST00000489438 (UPP2-003) 158126426-158135298 processed_transcript
ENST00000605860 (UPP2-002) 157876702-158136154 protein_coding
ENSG00000153237 (CCDC148)
coiled-coil domain containing 148 		ENST00000283233 (CCDC148-001) 158171081-158456753 protein_coding
ENST00000409187 (CCDC148-007) 158171544-158380960 protein_coding
ENST00000409889 (CCDC148-004) 158338593-158456702 protein_coding
ENST00000417066 (CCDC148-002) 158288588-158456753 nonsense_mediated_decay
ENST00000448656 (CCDC148-006) 158171974-158456566 nonsense_mediated_decay
ENST00000451554 (CCDC148-003) 158288623-158456708 nonsense_mediated_decay
ENST00000454257 (CCDC148-005) 158171357-158456599 nonsense_mediated_decay
ENST00000491563 (CCDC148-008) 158366014-158456726 processed_transcript
ENSG00000228937 (AC005539.2)
 ENST00000443768 (AC005539.2-001) 157961410-157962888 processed_pseudogene
ENSG00000231158 (PTP4A1P1)
protein tyrosine phosphatase type IVA, member 1 pseudogene 1 		ENST00000420539 (PTP4A1P1-001) 158065545-158066059 processed_pseudogene
ENSG00000234890 (HNRNPDLP2)
heterogeneous nuclear ribonucleoprotein D-like pseudogene 2 		ENST00000455248 (HNRNPDLP2-001) 158419955-158425303 unprocessed_pseudogene
ENSG00000237327 (UPP2-IT1)
UPP2 intronic transcript 1 (non-protein coding) 		ENST00000439185 (UPP2-IT1-001) 158127957-158133988 sense_intronic
ENSG00000243723 (RN7SL393P)
RNA, 7SL, cytoplasmic 393, pseudogene 		ENST00000463588 (RN7SL393P-201) 158447166-158447461 misc_RNA
ENSG00000270557 (RP11-546J1.1)
 ENST00000604340 (RP11-546J1.1-001) 157877683-157878565 lincRNA
ENSG00000271320 (RP11-1152H14.1)
 ENST00000604239 (RP11-1152H14.1-001) 157917712-157918371 lincRNA
CIL_000753_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026839-ENSMUSG00000036641 CGP 10090 2:58567298-59160683
GeneTranscriptPositionBiotype
ENSMUSG00000026839 (Upp2)
uridine phosphorylase 2 		ENSMUST00000059102 (Upp2-001) 58754942-58791242 protein_coding
ENSMUST00000071543 (Upp2-003) 58567387-58792971 protein_coding
ENSMUST00000102755 (Upp2-002) 58755180-58790668 protein_coding
ENSMUST00000128864 (Upp2-004) 58765325-58790302 processed_transcript
ENSMUST00000135737 (Upp2-005) 58567298-58635281 processed_transcript
ENSMUST00000137007 (Upp2-006) 58567318-58583782 processed_transcript
ENSMUSG00000036641 (Ccdc148)
coiled-coil domain containing 148 		ENSMUST00000077687 (Ccdc148-001) 58821697-59160683 protein_coding
ENSMUST00000131959 (Ccdc148-003) 59158825-59160534 processed_transcript
ENSMUST00000134708 (Ccdc148-002) 58823430-58921092 processed_transcript
ENSMUSG00000080985 (Gm13559)
predicted gene 13559 		ENSMUST00000120476 (Gm13559-001) 58740639-58741501 processed_pseudogene
ENSMUSG00000082989 (Gm13557)
predicted gene 13557 		ENSMUST00000120771 (Gm13557-001) 58958675-58959707 processed_pseudogene
ENSMUSG00000084250 (Gm13550)
predicted gene 13550 		ENSMUST00000118185 (Gm13550-001) 59148099-59148623 processed_pseudogene
ENSMUSG00000086129 (Gm13558)
predicted gene 13558 		ENSMUST00000140464 (Gm13558-001) 58705769-58735396 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000753_0001ENSG00000007001ENST00000005756ENST00000460456ENST00000489438ENST00000605860ENSG00000153237ENST00000283233ENST00000409187ENST00000409889ENST00000417066ENST00000448656ENST00000451554ENST00000454257ENST00000491563ENSG00000228937ENST00000443768ENSG00000231158ENST00000420539ENSG00000234890ENST00000455248ENSG00000237327ENST00000439185ENSG00000243723ENST00000463588ENSG00000270557ENST00000604340ENSG00000271320ENST00000604239CIL_000753_0002ENSMUSG00000026839ENSMUST00000059102ENSMUST00000071543ENSMUST00000102755ENSMUST00000128864ENSMUST00000135737ENSMUST00000137007ENSMUSG00000036641ENSMUST00000077687ENSMUST00000131959ENSMUST00000134708ENSMUSG00000080985ENSMUST00000120476ENSMUSG00000082989ENSMUST00000120771ENSMUSG00000084250ENSMUST00000118185ENSMUSG00000086129ENSMUST00000140464
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000753_0001ENSG00000007001ENST00000005756ENST00000460456ENST00000489438ENST00000605860ENSG00000153237ENST00000283233ENST00000409187ENST00000409889ENST00000417066ENST00000448656ENST00000451554ENST00000454257ENSG00000228937ENST00000443768ENSG00000231158ENST00000420539ENSG00000234890ENST00000455248ENSG00000237327ENST00000439185ENSG00000243723ENST00000463588ENSG00000270557ENST00000604340ENSG00000271320ENST00000604239CIL_000753_0002ENSMUSG00000026839ENSMUST00000059102ENSMUST00000071543ENSMUST00000102755ENSMUST00000128864ENSMUST00000135737ENSMUST00000137007ENSMUSG00000036641ENSMUST00000077687ENSMUST00000131959ENSMUST00000134708ENSMUSG00000080985ENSMUST00000120476ENSMUSG00000082989ENSMUST00000120771ENSMUSG00000084250ENSMUST00000118185ENSMUSG00000086129ENSMUST00000140464
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000007001 ENST00000005756 N/A N/A 6.260±0.00 N/A N/A N/A N/A 0.634±0.52 0.272±0.23 N/A N/A 0.052±0.00 N/A N/A
ENST00000460456 N/A N/A N/A 0.146±0.00 N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A 0.028±0.00 N/A
ENST00000489438 N/A N/A N/A N/A N/A 0.113±0.00 0.254±0.00 N/A N/A 0.131±0.09 N/A N/A N/A N/A
ENST00000605860 N/A N/A N/A 0.568±0.00 N/A 0.012±0.00 N/A 0.407±0.00 1.694±0.00 N/A N/A 0.071±0.03 N/A 0.020±0.01
ENSG00000153237 ENST00000283233 N/A 0.003±0.00 N/A N/A N/A N/A 0.005±0.00 N/A N/A 0.132±0.00 N/A N/A N/A N/A
ENST00000409187 N/A N/A 0.613±0.00 N/A N/A N/A N/A 0.189±0.00 0.147±0.00 0.247±0.00 N/A N/A 0.027±0.00 N/A
ENST00000409889 0.027±0.00 N/A 1.818±0.00 N/A 0.839±0.00 N/A N/A N/A N/A N/A N/A 0.266±0.08 N/A 0.645±0.00
ENST00000417066 N/A N/A 2.384±0.00 N/A 0.015±0.00 N/A N/A N/A 0.641±0.00 0.320±0.00 N/A 0.249±0.12 N/A N/A
ENST00000448656 0.056±0.00 0.027±0.00 1.983±0.00 0.290±0.00 0.118±0.08 0.071±0.01 0.086±0.06 0.376±0.00 0.037±0.00 0.218±0.09 N/A 0.225±0.16 0.021±0.00 2.085±0.26
ENST00000451554 N/A N/A N/A 0.896±0.00 N/A N/A 0.106±0.00 N/A N/A 0.179±0.00 N/A N/A N/A N/A
ENST00000454257 N/A 0.006±0.00 N/A 0.578±0.00 N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A N/A
ENST00000491563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228937 ENST00000443768 N/A N/A N/A N/A 0.020±0.00 0.101±0.00 N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A
ENSG00000231158 ENST00000420539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A 0.038±0.00
ENSG00000234890 ENST00000455248 N/A N/A 0.097±0.00 N/A N/A N/A 0.022±0.00 0.044±0.00 N/A N/A N/A 0.151±0.00 N/A N/A
ENSG00000237327 ENST00000439185 N/A N/A 3.199±0.00 N/A N/A N/A N/A 0.211±0.00 0.231±0.00 N/A N/A 0.091±0.00 N/A N/A
ENSG00000243723 ENST00000463588 N/A N/A 1.875±0.00 N/A 0.793±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270557 ENST00000604340 0.142±0.00 0.351±0.00 0.857±0.00 0.625±0.04 0.346±0.00 0.166±0.11 0.063±0.01 0.367±0.00 0.189±0.03 0.042±0.00 0.059±0.00 0.366±0.17 N/A 0.169±0.06
ENSG00000271320 ENST00000604239 0.174±0.00 N/A N/A 0.248±0.00 0.198±0.00 0.093±0.00 0.110±0.00 0.100±0.00 N/A N/A N/A 0.352±0.16 0.055±0.00 0.062±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026839 ENSMUST00000059102 N/A N/A N/A N/A N/A N/A N/A 0.611±0.08 10.124±4.03 N/A N/A N/A N/A 0.054±0.00
ENSMUST00000071543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00
ENSMUST00000102755 N/A N/A N/A N/A N/A N/A N/A 0.841±0.26 26.677±20.96 N/A 0.026±0.00 N/A N/A 1.582±0.68
ENSMUST00000128864 N/A N/A N/A N/A N/A N/A N/A 1.287±0.00 17.323±3.32 N/A N/A N/A 0.125±0.00 1.852±0.47
ENSMUST00000135737 0.147±0.05 N/A N/A 0.353±0.10 0.130±0.04 N/A 0.117±0.03 0.243±0.00 N/A 0.273±0.07 0.032±0.01 0.376±0.13 0.019±0.01 0.016±0.00
ENSMUST00000137007 3.718±1.07 8.452±2.36 7.274±1.07 5.542±1.32 2.911±0.59 5.176±2.04 1.664±0.49 7.337±0.77 1.425±0.12 3.398±0.71 1.638±0.59 6.025±0.96 1.389±0.84 N/A
ENSMUSG00000036641 ENSMUST00000077687 0.051±0.04 0.131±0.06 0.112±0.00 1.046±0.97 0.036±0.02 0.055±0.02 0.043±0.01 0.593±0.25 0.073±0.03 0.134±0.06 0.010±0.00 0.256±0.19 0.019±0.01 1.463±1.24
ENSMUST00000131959 0.087±0.00 N/A N/A N/A N/A 0.149±0.00 0.054±0.02 N/A N/A 0.122±0.00 0.024±0.01 N/A 0.026±0.02 N/A
ENSMUST00000134708 0.013±0.00 N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A 0.025±0.01 N/A N/A N/A N/A
ENSMUSG00000080985 ENSMUST00000120476 N/A 0.251±0.05 0.016±0.01 0.019±0.01 N/A N/A N/A 0.052±0.02 0.035±0.02 N/A N/A N/A 0.013±0.00 0.043±0.00
ENSMUSG00000082989 ENSMUST00000120771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.309±0.15
ENSMUSG00000084250 ENSMUST00000118185 N/A N/A 0.022±0.00 0.113±0.07 N/A N/A N/A N/A N/A N/A N/A 0.094±0.00 N/A 0.130±0.00
ENSMUSG00000086129 ENSMUST00000140464 N/A 0.251±0.01 0.018±0.00 0.144±0.00 N/A N/A N/A 0.081±0.00 0.014±0.00 0.097±0.00 0.084±0.00 0.274±0.26 0.023±0.00 1.478±0.00

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