C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007A9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006816-ENSDARG00000006816 CGP 7955 9:19447406-19523363
GeneTranscriptPositionBiotype
ENSDARG00000006816 (gtf2f2b)
general transcription factor IIF, polypeptide 2b 		ENSDART00000006514 (gtf2f2b-001) 19447406-19523363 protein_coding
ENSDARG00000068691 (kctd4)
potassium channel tetramerisation domain containing 4 		ENSDART00000099446 (kctd4-001) 19494082-19495643 protein_coding
CIL_0007A9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188342-ENSG00000188342 CGP 9606 13:45120515-45284909
GeneTranscriptPositionBiotype
ENSG00000180332 (KCTD4)
potassium channel tetramerization domain containing 4 		ENST00000379108 (KCTD4-001) 45192853-45194717 protein_coding
ENSG00000188342 (GTF2F2)
general transcription factor IIF, polypeptide 2, 30kDa 		ENST00000340473 (GTF2F2-001) 45120515-45284909 protein_coding
ENST00000461904 (GTF2F2-003) 45219353-45267363 processed_transcript
ENST00000494087 (GTF2F2-002) 45206355-45267333 processed_transcript
ENSG00000270381 (RP11-290D2.5)
 ENST00000605137 (RP11-290D2.5-001) 45263690-45263915 processed_pseudogene
ENSG00000271818 (7SK)
7SK RNA 		ENST00000606815 (7SK.1-210) 45123093-45123414 misc_RNA
ENSG00000277358 (RP11-321C24.4)
 ENST00000622219 (RP11-321C24.4-001) 45124015-45124143 unprocessed_pseudogene
CIL_0007A9_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000067995-ENSMUSG00000067995 CGP 10090 14:75896937-76010865
GeneTranscriptPositionBiotype
ENSMUSG00000046523 (Kctd4)
potassium channel tetramerisation domain containing 4 		ENSMUST00000050120 (Kctd4-201) 75955003-75965217 protein_coding
ENSMUSG00000065799 (Gm25517)
predicted gene, 25517 		ENSMUST00000083865 (Gm25517-201) 75972486-75972619 snoRNA
ENSMUSG00000067995 (Gtf2f2)
general transcription factor IIF, polypeptide 2 		ENSMUST00000088922 (Gtf2f2-201) 75896937-76010865 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007A9_0001ENSDARG00000006816ENSDART00000006514ENSDARG00000068691ENSDART00000099446CIL_0007A9_0002ENSG00000180332ENST00000379108ENSG00000188342ENST00000340473ENST00000461904ENST00000494087ENSG00000270381ENST00000605137ENSG00000271818ENST00000606815ENSG00000277358ENST00000622219CIL_0007A9_0003ENSMUSG00000046523ENSMUST00000050120ENSMUSG00000065799ENSMUST00000083865ENSMUSG00000067995ENSMUST00000088922
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007A9_0001ENSDARG00000006816ENSDART00000006514ENSDARG00000068691ENSDART00000099446CIL_0007A9_0002ENSG00000180332ENST00000379108ENSG00000188342ENST00000340473ENSG00000270381ENST00000605137ENSG00000271818ENST00000606815ENSG00000277358ENST00000622219CIL_0007A9_0003ENSMUSG00000046523ENSMUST00000050120ENSMUSG00000065799ENSMUST00000083865ENSMUSG00000067995ENSMUST00000088922
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006816 ENSDART00000006514 N/A N/A N/A 0.264±0.18 N/A N/A 0.058±0.00 4.122±0.00 0.143±0.00 N/A 0.074±0.00 N/A N/A N/A
ENSDARG00000068691 ENSDART00000099446 N/A N/A N/A 24.145±5.81 N/A N/A N/A N/A N/A N/A 1.345±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000180332 ENST00000379108 N/A N/A 0.097±0.00 3.377±0.00 N/A 0.515±0.14 0.063±0.00 0.034±0.01 N/A 0.018±0.00 N/A 0.013±0.00 N/A N/A
ENSG00000188342 ENST00000340473 3.457±0.00 5.219±0.00 1.253±0.00 3.852±1.13 3.691±0.41 4.117±0.67 3.470±0.63 2.374±0.69 4.147±1.22 3.285±0.20 2.753±0.62 10.278±3.28 3.588±0.98 6.046±0.15
ENST00000461904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270381 ENST00000605137 N/A N/A N/A N/A N/A 3.426±0.00 0.845±0.00 N/A 2.509±0.00 N/A N/A 4.945±0.00 N/A 0.161±0.05
ENSG00000271818 ENST00000606815 N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A 0.387±0.00 N/A 0.160±0.01
ENSG00000277358 ENST00000622219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.594±0.00 38.694±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046523 ENSMUST00000050120 0.697±0.01 N/A 0.019±0.01 1.737±0.90 0.545±0.08 0.101±0.11 0.035±0.02 0.025±0.01 0.022±0.01 0.261±0.05 0.010±0.00 0.277±0.15 0.043±0.03 0.087±0.03
ENSMUSG00000065799 ENSMUST00000083865 N/A N/A 59.370±38.14 9.833±1.83 N/A N/A N/A N/A 5.485±1.11 N/A N/A N/A 10.365±0.70 N/A
ENSMUSG00000067995 ENSMUST00000088922 2.600±0.60 6.412±0.69 5.515±0.22 7.323±1.42 1.679±0.55 2.174±0.96 1.432±0.17 1.894±0.36 5.116±3.58 1.757±0.34 4.692±0.34 6.285±5.29 17.029±8.30 10.671±9.98

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