C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007AR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058287-ENSDARG00000069910 CGP 7955 1:34318086-34339584
GeneTranscriptPositionBiotype
ENSDARG00000058287 (gpalpp1)
GPALPP motifs containing 1 		ENSDART00000037986 (gpalpp1-001) 34318086-34327046 protein_coding
ENSDART00000149891 (gpalpp1-002) 34318126-34321323 nonsense_mediated_decay
ENSDARG00000069910 (gtf2f2a)
general transcription factor IIF, polypeptide 2a 		ENSDART00000077744 (gtf2f2a-002) 34328054-34339444 protein_coding
ENSDART00000102118 (gtf2f2a-001) 34328059-34339584 protein_coding
ENSDART00000135528 (gtf2f2a-004) 34328070-34339360 protein_coding
ENSDART00000145535 (gtf2f2a-003) 34328195-34339151 processed_transcript
ENSDART00000150038 (gtf2f2a-005) 34333825-34339502 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0007AR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133114-ENSG00000188342 CGP 9606 13:44989529-45284909
GeneTranscriptPositionBiotype
ENSG00000133114 (GPALPP1)
GPALPP motifs containing 1 		ENST00000357537 (GPALPP1-002) 45005110-45037669 protein_coding
ENST00000361121 (GPALPP1-008) 44989564-45030305 protein_coding
ENST00000379151 (GPALPP1-001) 44989552-45028270 protein_coding
ENST00000473119 (GPALPP1-006) 45031204-45033611 processed_transcript
ENST00000479068 (GPALPP1-004) 44989615-45002040 processed_transcript
ENST00000497558 (GPALPP1-003) 44989620-45033602 nonsense_mediated_decay
ENST00000611650 (GPALPP1-007) 44989529-44990427 protein_coding
ENSG00000180332 (KCTD4)
potassium channel tetramerization domain containing 4 		ENST00000379108 (KCTD4-001) 45192853-45194717 protein_coding
ENSG00000188342 (GTF2F2)
general transcription factor IIF, polypeptide 2, 30kDa 		ENST00000340473 (GTF2F2-001) 45120515-45284909 protein_coding
ENST00000461904 (GTF2F2-003) 45219353-45267363 processed_transcript
ENST00000494087 (GTF2F2-002) 45206355-45267333 processed_transcript
ENSG00000265802 (RN7SL49P)
RNA, 7SL, cytoplasmic 49, pseudogene 		ENST00000581392 (RN7SL49P-201) 45002150-45002447 misc_RNA
ENSG00000270381 (RP11-290D2.5)
 ENST00000605137 (RP11-290D2.5-001) 45263690-45263915 processed_pseudogene
ENSG00000271818 (7SK)
7SK RNA 		ENST00000606815 (7SK.1-210) 45123093-45123414 misc_RNA
ENSG00000277358 (RP11-321C24.4)
 ENST00000622219 (RP11-321C24.4-001) 45124015-45124143 unprocessed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AR_0001ENSDARG00000058287ENSDART00000037986ENSDART00000149891ENSDARG00000069910ENSDART00000077744ENSDART00000102118ENSDART00000135528ENSDART00000145535ENSDART00000150038CIL_0007AR_0002ENSG00000133114ENST00000357537ENST00000361121ENST00000379151ENST00000473119ENST00000479068ENST00000497558ENST00000611650ENSG00000180332ENST00000379108ENSG00000188342ENST00000340473ENST00000461904ENST00000494087ENSG00000265802ENST00000581392ENSG00000270381ENST00000605137ENSG00000271818ENST00000606815ENSG00000277358ENST00000622219
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AR_0001ENSDARG00000058287ENSDART00000037986ENSDART00000149891ENSDARG00000069910ENSDART00000077744ENSDART00000102118ENSDART00000150038CIL_0007AR_0002ENSG00000133114ENST00000357537ENST00000361121ENST00000379151ENST00000473119ENST00000497558ENSG00000180332ENST00000379108ENSG00000188342ENST00000340473ENSG00000265802ENST00000581392ENSG00000270381ENST00000605137ENSG00000271818ENST00000606815ENSG00000277358ENST00000622219
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058287 ENSDART00000037986 N/A N/A N/A 4.915±3.18 N/A N/A 4.385±0.87 3.159±2.05 0.319±0.00 N/A 1.276±0.00 N/A N/A N/A
ENSDART00000149891 N/A N/A N/A 3.955±1.06 N/A N/A 5.903±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000069910 ENSDART00000077744 N/A N/A N/A 8.190±1.15 N/A N/A 3.356±0.51 9.650±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000102118 N/A N/A N/A 6.962±3.64 N/A N/A 9.790±2.65 34.264±20.05 0.595±0.00 N/A 4.898±0.00 N/A N/A N/A
ENSDART00000135528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150038 N/A N/A N/A 8.064±1.99 N/A N/A 2.848±0.18 N/A 1.316±0.00 N/A 2.321±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133114 ENST00000357537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.486±0.00 N/A N/A
ENST00000361121 N/A N/A N/A N/A 1.276±0.00 N/A N/A N/A 0.833±0.00 N/A N/A N/A N/A N/A
ENST00000379151 2.094±0.00 1.609±0.00 1.627±0.00 2.963±0.35 3.041±0.30 2.910±0.00 0.942±0.05 2.288±0.44 2.262±1.50 2.423±0.41 0.834±0.00 4.914±2.29 4.340±2.00 6.236±0.52
ENST00000473119 N/A N/A 1.732±0.00 5.431±3.12 N/A 1.647±0.00 N/A 1.528±0.00 4.362±0.00 3.774±0.00 2.457±0.00 N/A N/A 3.073±0.00
ENST00000479068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497558 1.726±0.00 1.880±0.00 0.374±0.00 1.863±0.82 1.896±0.04 1.397±0.00 0.899±0.29 1.631±0.00 0.890±0.00 1.302±0.40 1.188±0.86 1.976±0.63 1.090±0.25 1.345±0.00
ENST00000611650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180332 ENST00000379108 N/A N/A 0.097±0.00 3.377±0.00 N/A 0.515±0.14 0.063±0.00 0.034±0.01 N/A 0.018±0.00 N/A 0.013±0.00 N/A N/A
ENSG00000188342 ENST00000340473 3.457±0.00 5.219±0.00 1.253±0.00 3.852±1.13 3.691±0.41 4.117±0.67 3.470±0.63 2.374±0.69 4.147±1.22 3.285±0.20 2.753±0.62 10.278±3.28 3.588±0.98 6.046±0.15
ENST00000461904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265802 ENST00000581392 N/A 0.540±0.00 N/A N/A 0.202±0.06 N/A 0.125±0.00 N/A 1.446±0.00 1.981±0.00 N/A 0.986±0.55 N/A N/A
ENSG00000270381 ENST00000605137 N/A N/A N/A N/A N/A 3.426±0.00 0.845±0.00 N/A 2.509±0.00 N/A N/A 4.945±0.00 N/A 0.161±0.05
ENSG00000271818 ENST00000606815 N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A 0.387±0.00 N/A 0.160±0.01
ENSG00000277358 ENST00000622219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.594±0.00 38.694±0.00 N/A N/A

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