C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007F7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079848-ENSDARG00000005942 CGP 7955 18:32408894-32469977
GeneTranscriptPositionBiotype
ENSDARG00000005942 (v2rl1)
vomeronasal 2 receptor, l1
ENSDART00000027938 (v2rl1-201) 32452939-32469977 protein_coding
ENSDART00000126115 (v2rl1-001) 32452939-32469977 protein_coding
ENSDARG00000079848 (gmps)
guanine monphosphate synthetase
ENSDART00000109535 (gmps-001) 32408894-32442476 protein_coding
ENSDART00000130831 (gmps-002) 32409074-32423164 protein_coding
ENSDART00000136048 (gmps-003) 32414501-32421511 processed_transcript
ENSDART00000141266 (gmps-004) 32416739-32421793 retained_intron
CIL_0007F7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027823-ENSMUSG00000027824 CGP 10090 3:63976106-64105458
GeneTranscriptPositionBiotype
ENSMUSG00000027823 (Gmps)
guanine monophosphate synthetase
ENSMUST00000029405 (Gmps-001) 63976106-64022579 protein_coding
ENSMUST00000163074 (Gmps-002) 63976210-63983452 retained_intron
ENSMUSG00000027824 (Vmn2r1)
vomeronasal 2, receptor 1
ENSMUST00000029406 (Vmn2r1-001) 64081642-64105458 protein_coding
ENSMUSG00000090303 (Vmn2r-ps3)
vomeronasal 2, receptor, pseudogene 3
ENSMUST00000176077 (Vmn2r-ps3-001) 64053031-64055610 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007F7_0001ENSDARG00000005942ENSDART00000027938ENSDART00000126115ENSDARG00000079848ENSDART00000109535ENSDART00000130831ENSDART00000136048ENSDART00000141266CIL_0007F7_0002ENSMUSG00000027823ENSMUST00000029405ENSMUST00000163074ENSMUSG00000027824ENSMUST00000029406ENSMUSG00000090303ENSMUST00000176077
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007F7_0001ENSDARG00000005942ENSDART00000027938ENSDART00000126115ENSDARG00000079848ENSDART00000109535CIL_0007F7_0002ENSMUSG00000027823ENSMUST00000029405ENSMUST00000163074ENSMUSG00000027824ENSMUST00000029406ENSMUSG00000090303ENSMUST00000176077
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005942 ENSDART00000027938 N/A N/A N/A 0.027±0.00 N/A N/A 0.043±0.00 0.022±0.00 0.035±0.00 N/A N/A N/A N/A N/A
ENSDART00000126115 N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000079848 ENSDART00000109535 N/A N/A N/A 7.897±5.02 N/A N/A 5.150±1.18 11.197±2.94 2.645±0.00 N/A 3.438±0.00 N/A N/A N/A
ENSDART00000130831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027823 ENSMUST00000029405 3.729±1.34 3.470±1.49 4.193±0.14 5.230±2.02 3.290±1.04 2.230±0.51 3.244±0.49 3.629±0.33 5.236±1.99 3.231±0.48 2.302±0.29 5.649±1.16 5.165±2.03 15.787±0.79
ENSMUST00000163074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.297±0.70 N/A N/A
ENSMUSG00000027824 ENSMUST00000029406 0.036±0.02 0.215±0.09 0.023±0.00 0.266±0.02 0.103±0.07 0.049±0.02 N/A 0.021±0.01 0.007±0.00 0.037±0.02 0.095±0.03 0.169±0.13 0.021±0.01 0.131±0.07
ENSMUSG00000090303 ENSMUST00000176077 N/A N/A 0.083±0.01 N/A 0.073±0.05 N/A N/A N/A 0.009±0.00 N/A 0.054±0.01 0.178±0.14 0.045±0.01 0.049±0.01

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