C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007FZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076040-ENSDARG00000076040 CGP 7955 5:41919725-42094533
GeneTranscriptPositionBiotype
ENSDARG00000067714 (hspb3)
heat shock protein, alpha-crystallin-related, b3 		ENSDART00000097526 (hspb3-001) 41921681-41922133 protein_coding
ENSDARG00000076040 (arl15a)
ADP-ribosylation factor-like 15a 		ENSDART00000109676 (arl15a-201) 41962674-41994422 protein_coding
ENSDART00000142157 (arl15a-001) 41924698-42094533 protein_coding
ENSDART00000145679 (arl15a-002) 41919725-42094266 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0007FZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185305-ENSG00000169271 CGP 9606 5:53883945-54456384
GeneTranscriptPositionBiotype
ENSG00000169271 (HSPB3)
heat shock 27kDa protein 3 		ENST00000302005 (HSPB3-001) 54455601-54456384 protein_coding
ENSG00000185305 (ARL15)
ADP-ribosylation factor-like 15 		ENST00000502271 (ARL15-001) 53883945-54310582 protein_coding
ENST00000504924 (ARL15-004) 53884784-54310573 protein_coding
ENST00000505383 (ARL15-005) 54154391-54310573 retained_intron
ENST00000505630 (ARL15-006) 54113133-54310576 retained_intron
ENST00000507646 (ARL15-003) 53887365-54310576 protein_coding
ENST00000510591 (ARL15-002) 53886445-54310415 processed_transcript
ENST00000620747 (ARL15-201) 53884784-54310573 protein_coding
ENSG00000207627 (MIR581)
microRNA 581 		ENST00000384895 (MIR581-201) 53951504-53951599 miRNA
ENSG00000222960 (RNU6-272P)
RNA, U6 small nuclear 272, pseudogene 		ENST00000411028 (RNU6-272P-201) 53912020-53912123 snRNA
ENSG00000241230 (RN7SL801P)
RNA, 7SL, cytoplasmic 801, pseudogene 		ENST00000479462 (RN7SL801P-201) 54048007-54048308 misc_RNA
ENSG00000251597 (RPL37P25)
ribosomal protein L37 pseudogene 25 		ENST00000507308 (RPL37P25-001) 54399439-54400033 processed_pseudogene
ENSG00000265421 (MIR4459)
microRNA 4459 		ENST00000581837 (MIR4459-201) 54075518-54075583 miRNA
ENSG00000279638 (CTD-2081C10.5)
 ENST00000625051 (CTD-2081C10.5-001) 54286194-54286331 TEC

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FZ_0001ENSDARG00000067714ENSDART00000097526ENSDARG00000076040ENSDART00000109676ENSDART00000142157ENSDART00000145679CIL_0007FZ_0002ENSG00000169271ENST00000302005ENSG00000185305ENST00000502271ENST00000504924ENST00000505383ENST00000505630ENST00000507646ENST00000510591ENST00000620747ENSG00000207627ENST00000384895ENSG00000222960ENST00000411028ENSG00000241230ENST00000479462ENSG00000251597ENST00000507308ENSG00000265421ENST00000581837ENSG00000279638ENST00000625051
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FZ_0001ENSDARG00000067714ENSDART00000097526ENSDARG00000076040ENSDART00000109676ENSDART00000142157ENSDART00000145679CIL_0007FZ_0002ENSG00000169271ENST00000302005ENSG00000185305ENST00000502271ENST00000504924ENST00000505630ENST00000507646ENST00000510591ENST00000620747ENSG00000207627ENST00000384895ENSG00000222960ENST00000411028ENSG00000241230ENST00000479462ENSG00000251597ENST00000507308ENSG00000265421ENST00000581837ENSG00000279638ENST00000625051
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000067714 ENSDART00000097526 N/A N/A N/A 1.630±0.19 N/A N/A N/A 1.332±0.00 0.195±0.00 N/A 6.162±0.00 N/A N/A N/A
ENSDARG00000076040 ENSDART00000109676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A
ENSDART00000142157 N/A N/A N/A 0.352±0.16 N/A N/A 0.229±0.00 N/A N/A N/A 0.080±0.00 N/A N/A N/A
ENSDART00000145679 N/A N/A N/A 0.490±0.00 N/A N/A N/A 1.058±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169271 ENST00000302005 N/A 2.045±0.00 N/A 1.890±0.24 1.282±0.00 1.628±0.00 105.808±63.40 0.062±0.00 0.729±0.71 0.943±0.00 37.369±20.34 0.785±0.71 0.455±0.51 2.618±2.07
ENSG00000185305 ENST00000502271 N/A N/A 0.810±0.00 1.059±0.00 N/A N/A 0.200±0.00 N/A N/A N/A N/A 1.041±0.13 1.114±0.00 0.527±0.00
ENST00000504924 N/A N/A 2.694±0.00 2.906±0.00 4.110±0.00 3.068±0.00 1.241±0.00 N/A 2.318±0.00 1.649±0.00 N/A N/A N/A N/A
ENST00000505383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505630 N/A N/A N/A N/A N/A 6.312±0.00 4.598±0.00 N/A N/A 7.729±0.00 5.355±0.00 N/A N/A N/A
ENST00000507646 N/A N/A 12.035±0.00 N/A 4.129±0.00 N/A N/A N/A N/A 7.370±0.00 N/A N/A N/A N/A
ENST00000510591 N/A N/A N/A N/A N/A N/A N/A 1.642±0.00 N/A N/A N/A N/A N/A N/A
ENST00000620747 N/A N/A N/A N/A N/A N/A N/A 1.046±0.00 N/A N/A 0.359±0.00 2.184±0.00 N/A N/A
ENSG00000207627 ENST00000384895 N/A N/A N/A N/A 0.366±0.00 0.683±0.00 N/A N/A N/A N/A N/A N/A N/A 1.572±0.00
ENSG00000222960 ENST00000411028 N/A N/A N/A N/A N/A N/A N/A 38.618±0.00 70.669±0.00 N/A N/A 0.515±0.00 N/A N/A
ENSG00000241230 ENST00000479462 N/A 0.688±0.00 4.584±0.00 0.198±0.00 5.993±0.00 3.690±0.00 0.174±0.00 0.059±0.00 0.980±0.00 0.160±0.00 N/A N/A 0.278±0.00 N/A
ENSG00000251597 ENST00000507308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00
ENSG00000265421 ENST00000581837 N/A 0.737±0.00 N/A N/A N/A N/A 0.780±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000279638 ENST00000625051 N/A N/A N/A N/A N/A N/A 1.404±1.12 N/A N/A N/A N/A N/A N/A N/A

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