C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007Q2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs851 VISTA 9606 18:38883799-39484827
GeneTranscriptPositionBiotype
ENSG00000175886 (RPL7AP66)
ribosomal protein L7a pseudogene 66 		ENST00000588490 (RPL7AP66-001) 39334872-39335672 processed_pseudogene
ENSG00000267374 (LINC00669)
long intergenic non-protein coding RNA 669 		ENST00000591469 (LINC00669-002) 39207627-39340638 lincRNA
ENST00000591629 (LINC00669-001) 39206924-39800318 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
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Structures from Ensembl
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CIL_0007Q2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs851 VISTA 10090 18:27197307-27798342
GeneTranscriptPositionBiotype
ENSMUSG00000046636 (Gm7729)
predicted gene 7729 		ENSMUST00000050143 (Gm7729-001) 27598644-27599756 unprocessed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
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Genes
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Q2_0001ENSG00000175886ENST00000588490ENSG00000267374ENST00000591469ENST00000591629CIL_0007Q2_0002ENSMUSG00000046636ENSMUST00000050143
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Q2_0001ENSG00000175886ENST00000588490ENSG00000267374ENST00000591469ENST00000591629CIL_0007Q2_0002ENSMUSG00000046636ENSMUST00000050143
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175886 ENST00000588490 0.121±0.00 0.235±0.00 N/A 0.079±0.04 0.123±0.07 0.174±0.08 0.024±0.00 0.138±0.00 0.024±0.00 0.124±0.09 0.230±0.00 0.063±0.03 0.071±0.01 0.147±0.03
ENSG00000267374 ENST00000591469 0.041±0.00 N/A N/A 0.036±0.02 0.039±0.00 N/A N/A N/A 0.010±0.00 N/A N/A N/A 0.018±0.00 0.682±0.00
ENST00000591629 0.039±0.00 0.008±0.00 N/A N/A 0.093±0.00 0.249±0.00 N/A N/A 0.081±0.00 N/A N/A 0.034±0.01 0.073±0.03 0.491±0.18
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046636 ENSMUST00000050143 0.058±0.00 N/A 1.317±1.31 1.511±2.10 N/A N/A N/A 0.060±0.00 3.853±3.87 0.234±0.00 N/A 0.063±0.01 0.094±0.11 0.052±0.00

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