C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007QD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1004 VISTA 9606 9:79766353-80367777
GeneTranscriptPositionBiotype
ENSG00000230945 (LINC01507)
long intergenic non-protein coding RNA 1507 		ENST00000417801 (LINC01507-001) 80030579-80034555 lincRNA
ENSG00000232494 (RP11-403N16.2)
 ENST00000448475 (RP11-403N16.2-001) 79874696-79886678 lincRNA
ENSG00000236521 (NPAP1P4)
nuclear pore associated protein 1 pseudogene 4 		ENST00000443325 (NPAP1P4-001) 80357029-80360338 processed_pseudogene
ENSG00000238002 (NPAP1P6)
nuclear pore associated protein 1 pseudogene 6 		ENST00000440671 (NPAP1P6-001) 79863019-79866875 processed_pseudogene
ENSG00000260564 (RP11-403N16.3)
 ENST00000565707 (RP11-403N16.3-001) 79889001-79892007 lincRNA
ENSG00000270691 (RP11-403N16.5)
 ENST00000605404 (RP11-403N16.5-001) 79850871-79851498 processed_pseudogene
ENSG00000279715 (RP11-403N16.4)
 ENST00000623889 (RP11-403N16.4-001) 79913269-79915736 TEC
ENSG00000280366 (RP11-327L9.1)
 ENST00000622930 (RP11-327L9.1-001) 79975023-79990064 lincRNA
CIL_0007QD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1004 VISTA 10090 19:13823241-14424629
GeneTranscriptPositionBiotype
ENSMUSG00000059105 (Olfr1504)
olfactory receptor 1504 		ENSMUST00000078282 (Olfr1504-201) 13887221-13888305 protein_coding
ENSMUSG00000098074 (Gm26993)
predicted gene, 26993 		ENSMUST00000182766 (Gm26993-001) 14017583-14018371 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisCIL_0007QD_0001ENSG00000230945ENST00000417801ENSG00000232494ENST00000448475ENSG00000236521ENST00000443325ENSG00000238002ENST00000440671ENSG00000260564ENST00000565707ENSG00000270691ENST00000605404ENSG00000279715ENST00000623889ENSG00000280366ENST00000622930CIL_0007QD_0002ENSMUSG00000059105ENSMUST00000078282ENSMUSG00000098074ENSMUST00000182766
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisCIL_0007QD_0001ENSG00000230945ENST00000417801ENSG00000232494ENST00000448475ENSG00000236521ENST00000443325ENSG00000238002ENST00000440671ENSG00000260564ENST00000565707ENSG00000270691ENST00000605404ENSG00000279715ENST00000623889ENSG00000280366ENST00000622930CIL_0007QD_0002ENSMUSG00000059105ENSMUST00000078282ENSMUSG00000098074ENSMUST00000182766
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSG00000230945 ENST00000417801 N/A 0.223±0.00 21.679±0.00 1.589±0.00 0.349±0.00 1.288±0.00 0.079±0.00 1.551±0.00 N/A 0.565±0.00 0.405±0.47 0.086±0.00 0.183±0.02
ENSG00000232494 ENST00000448475 N/A N/A N/A N/A N/A N/A N/A 0.123±0.00 N/A N/A 0.095±0.00 N/A 1.729±1.09
ENSG00000236521 ENST00000443325 N/A 0.122±0.00 0.703±0.00 N/A 0.012±0.00 0.006±0.00 0.005±0.00 0.177±0.00 0.144±0.00 0.083±0.00 0.093±0.06 N/A 0.068±0.06
ENSG00000238002 ENST00000440671 0.010±0.00 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A 2.267±1.95
ENSG00000260564 ENST00000565707 N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A 0.007±0.00 N/A 1.051±0.93
ENSG00000270691 ENST00000605404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.01
ENSG00000279715 ENST00000623889 N/A 0.065±0.00 N/A 0.051±0.00 0.059±0.00 0.068±0.00 0.015±0.00 0.030±0.00 0.019±0.00 N/A 0.026±0.02 0.017±0.00 0.579±0.46
ENSG00000280366 ENST00000622930 N/A N/A 0.574±0.00 0.047±0.00 N/A N/A N/A 0.111±0.00 N/A N/A N/A 0.055±0.00 0.215±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUSG00000059105 ENSMUST00000078282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.012±0.00
ENSMUSG00000098074 ENSMUST00000182766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A

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