C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007QP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm313 VISTA 9606 12:91747441-92348008
GeneTranscriptPositionBiotype
ENSG00000133639 (BTG1)
B-cell translocation gene 1, anti-proliferative 		ENST00000256015 (BTG1-001) 92140278-92145897 protein_coding
ENST00000552315 (BTG1-003) 92144118-92145233 protein_coding
ENSG00000199895 (Y_RNA)
Y RNA 		ENST00000363025 (Y_RNA.1-287) 92170353-92170453 misc_RNA
ENSG00000239201 (RPL21P106)
ribosomal protein L21 pseudogene 106 		ENST00000496249 (RPL21P106-001) 92168400-92168877 processed_pseudogene
ENSG00000257863 (RP11-587P21.3)
 ENST00000551075 (RP11-587P21.3-001) 91901458-91906187 lincRNA
ENSG00000257893 (RP11-587P21.2)
 ENST00000546710 (RP11-587P21.2-001) 91877391-91880655 lincRNA
ENSG00000277851 (RP11-756G20.1)
 ENST00000615716 (RP11-756G20.1-001) 92247756-92363832 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007QP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm313 VISTA 10090 10:96408320-97008857
GeneTranscriptPositionBiotype
ENSMUSG00000036478 (Btg1)
B cell translocation gene 1, anti-proliferative 		ENSMUST00000038377 (Btg1-201) 96617001-96622813 protein_coding
ENSMUSG00000094249 (Gm20091)
predicted gene, 20091 		ENSMUST00000179683 (Gm20091-001) 96408850-96409038 processed_pseudogene
ENSMUSG00000097939 (Gm8601)
predicted gene 8601 		ENSMUST00000182096 (Gm8601-001) 96476479-96477387 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007QP_0001ENSG00000133639ENST00000256015ENST00000552315ENSG00000199895ENST00000363025ENSG00000239201ENST00000496249ENSG00000257863ENST00000551075ENSG00000257893ENST00000546710ENSG00000277851ENST00000615716CIL_0007QP_0002ENSMUSG00000036478ENSMUST00000038377ENSMUSG00000094249ENSMUST00000179683ENSMUSG00000097939ENSMUST00000182096
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007QP_0001ENSG00000133639ENST00000256015ENST00000552315ENSG00000199895ENST00000363025ENSG00000239201ENST00000496249ENSG00000257863ENST00000551075ENSG00000257893ENST00000546710ENSG00000277851ENST00000615716CIL_0007QP_0002ENSMUSG00000036478ENSMUST00000038377ENSMUSG00000094249ENSMUST00000179683ENSMUSG00000097939ENSMUST00000182096
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133639 ENST00000256015 N/A N/A 0.845±0.00 0.307±0.00 N/A N/A 0.296±0.00 N/A N/A 2.334±0.00 N/A N/A N/A N/A
ENST00000552315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 47.244±0.00 32.060±0.00 26.603±0.00
ENSG00000199895 ENST00000363025 N/A 0.720±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239201 ENST00000496249 N/A 0.238±0.00 N/A N/A 0.128±0.00 N/A 0.025±0.00 0.077±0.00 0.047±0.00 0.024±0.00 0.071±0.00 0.046±0.00 N/A 0.035±0.01
ENSG00000257863 ENST00000551075 N/A 0.020±0.00 N/A N/A 0.066±0.00 N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000257893 ENST00000546710 N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A 0.020±0.00 0.189±0.00 0.110±0.04
ENSG00000277851 ENST00000615716 0.171±0.00 0.198±0.00 0.433±0.00 0.112±0.00 0.304±0.00 0.121±0.02 0.062±0.03 0.071±0.00 N/A 0.358±0.00 N/A 0.285±0.21 0.067±0.00 0.227±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036478 ENSMUST00000038377 11.575±1.41 37.395±5.38 14.876±0.25 2.917±1.80 22.327±14.05 26.001±5.24 1.822±0.67 5.689±1.42 3.794±2.12 10.701±1.18 2.221±0.97 12.701±4.28 6.833±2.87 10.373±3.89
ENSMUSG00000094249 ENSMUST00000179683 11.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.579±0.00 N/A N/A
ENSMUSG00000097939 ENSMUST00000182096 N/A N/A N/A 0.018±0.00 0.067±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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