C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007TO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1983 VISTA 9606 9:30635538-31240150
GeneTranscriptPositionBiotype
ENSG00000215210 (RBMXP2)
RNA binding motif protein, X-linked pseudogene 2 		ENST00000434705 (RBMXP2-001) 30689105-30690272 processed_pseudogene
ENSG00000221111 (AL590726.2)
 ENST00000408184 (AL590726.2-201) 30771097-30771199 miRNA
ENSG00000223421 (RP11-572H4.1)
 ENST00000455940 (RP11-572H4.1-001) 31165618-31166980 processed_pseudogene
ENSG00000228557 (HSPA8P17)
heat shock 70kDa protein 8 pseudogene 17 		ENST00000427029 (HSPA8P17-001) 30988085-30990572 processed_pseudogene
ENSG00000233278 (RPS26P2)
ribosomal protein S26 pseudogene 2 		ENST00000440331 (RPS26P2-001) 30831878-30832225 processed_pseudogene
ENSG00000235626 (KRT18P66)
keratin 18 pseudogene 66 		ENST00000452970 (KRT18P66-001) 30773464-30774732 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0007TO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1983 VISTA 10090 4:38326191-38930323
GeneTranscriptPositionBiotype
ENSMUSG00000081427 (Gm12382)
predicted gene 12382 		ENSMUST00000122005 (Gm12382-001) 38663809-38664730 processed_pseudogene
ENSMUSG00000085632 (Gm12381)
predicted gene 12381 		ENSMUST00000126314 (Gm12381-001) 38571667-38855483 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007TO_0001ENSG00000215210ENST00000434705ENSG00000221111ENST00000408184ENSG00000223421ENST00000455940ENSG00000228557ENST00000427029ENSG00000233278ENST00000440331ENSG00000235626ENST00000452970CIL_0007TO_0002ENSMUSG00000081427ENSMUST00000122005ENSMUSG00000085632ENSMUST00000126314
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007TO_0001ENSG00000215210ENST00000434705ENSG00000221111ENST00000408184ENSG00000223421ENST00000455940ENSG00000228557ENST00000427029ENSG00000233278ENST00000440331ENSG00000235626ENST00000452970CIL_0007TO_0002ENSMUSG00000081427ENSMUST00000122005ENSMUSG00000085632ENSMUST00000126314
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000215210 ENST00000434705 0.024±0.00 N/A N/A 0.013±0.00 N/A 0.012±0.00 N/A 0.064±0.00 0.215±0.00 N/A 0.056±0.00 0.088±0.00 0.019±0.00 0.285±0.26
ENSG00000221111 ENST00000408184 N/A N/A N/A N/A N/A N/A 0.167±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000223421 ENST00000455940 N/A N/A 0.219±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228557 ENST00000427029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.015±0.00
ENSG00000233278 ENST00000440331 0.116±0.00 0.306±0.00 N/A N/A 0.064±0.00 0.179±0.00 0.055±0.00 0.064±0.00 0.224±0.00 0.420±0.00 0.054±0.00 N/A N/A 0.279±0.00
ENSG00000235626 ENST00000452970 N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000081427 ENSMUST00000122005 N/A N/A N/A N/A N/A N/A 0.093±0.03 0.077±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000085632 ENSMUST00000126314 N/A N/A 0.004±0.00 0.004±0.00 N/A N/A 0.047±0.02 N/A N/A N/A N/A 0.008±0.00 N/A N/A

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