C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12382
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122005 Gm12382-001 ENSMUSG00000081427 10090 + 4:38663809-38664730 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyENSMUST00000122005
Transcript ID Heart Kidney
ENSMUST00000122005 0.093±0.03 0.077±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TO CIL_0007TO_0002 VISTA 4:38326191-38930323

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330752 HNRNPA1-023 protein_coding Homo_sapiens 0 411
ENST00000340913 HNRNPA1-002 protein_coding Homo_sapiens 0 477
ENST00000342073 HNRNPA1P61-001 processed_pseudogene Homo_sapiens 0 433
ENST00000357495 HNRNPA1L2-001 protein_coding Homo_sapiens 0 593
ENST00000394002 HNRNPA1P6-001 unprocessed_pseudogene Homo_sapiens 0 405
ENST00000397777 HNRNPA1P41-001 processed_pseudogene Homo_sapiens 0 211
ENST00000404243 HNRNPA1P37-001 processed_pseudogene Homo_sapiens 0 420
ENST00000405292 HNRNPA1P19-001 processed_pseudogene Homo_sapiens 3.9937e-43 178
ENST00000411674 HNRNPA1P64-001 processed_pseudogene Homo_sapiens 0 333
ENST00000411857 HNRNPA1P54-001 processed_pseudogene Homo_sapiens 0 327
ENST00000416539 HNRNPA1P66-001 processed_pseudogene Homo_sapiens 0 357
ENST00000420836 HNRNPA1P70-001 processed_pseudogene Homo_sapiens 0 222
ENST00000422644 HNRNPA1P25-001 processed_pseudogene Homo_sapiens 0 296
ENST00000424115 HNRNPA1P21-001 processed_pseudogene Homo_sapiens 0 508
ENST00000424329 HNRNPA1P30-002 processed_transcript Homo_sapiens 3e-27 126
ENST00000424481 HNRNPA1P28-001 processed_pseudogene Homo_sapiens 0 488
ENST00000425806 HNRNPA1P68-001 processed_pseudogene Homo_sapiens 0 320
ENST00000426371 HNRNPA1P40-001 processed_pseudogene Homo_sapiens 0 435
ENST00000427917 HNRNPA1P63-001 processed_pseudogene Homo_sapiens 0 516
ENST00000429216 HNRNPA1P35-001 processed_pseudogene Homo_sapiens 0 549
ENST00000430583 HNRNPA1P59-001 processed_pseudogene Homo_sapiens 0 259
ENST00000436090 HNRNPA1P8-001 processed_pseudogene Homo_sapiens 0 614
ENST00000440214 AC108039.3-001 processed_pseudogene Homo_sapiens 0 189
ENST00000440547 HNRNPA1P39-001 processed_pseudogene Homo_sapiens 0 448
ENST00000440699 HNRNPA1P30-001 transcribed_processed_pseudogene Homo_sapiens 0 206
ENST00000441603 HNRNPA1P53-001 processed_pseudogene Homo_sapiens 0 512
ENST00000444886 HNRNPA1P15-001 processed_pseudogene Homo_sapiens 0 444
ENST00000444945 HNRNPA1P10-001 processed_pseudogene Homo_sapiens 0 632
ENST00000446472 HNRNPA1P73-001 processed_pseudogene Homo_sapiens 0 316
ENST00000450405 HNRNPA1P51-001 processed_pseudogene Homo_sapiens 0 544
ENST00000450624 HNRNPA1P9-001 processed_pseudogene Homo_sapiens 0 422
ENST00000452488 HNRNPA1P57-001 transcribed_processed_pseudogene Homo_sapiens 0 477
ENST00000452680 HNRNPA1P43-001 processed_pseudogene Homo_sapiens 0 281
ENST00000453073 HNRNPA1P47-001 processed_pseudogene Homo_sapiens 0 193
ENST00000491091 HNRNPA1P23-001 processed_pseudogene Homo_sapiens 0 206
ENST00000496620 HNRNPA1P17-001 unprocessed_pseudogene Homo_sapiens 0 235
ENST00000505935 HNRNPA1P55-001 processed_pseudogene Homo_sapiens 0 459
ENST00000508873 HNRNPA1P65-001 processed_pseudogene Homo_sapiens 0 427
ENST00000509706 HNRNPA1P4-001 processed_pseudogene Homo_sapiens 0 496
ENST00000510646 HNRNPA1P13-001 processed_pseudogene Homo_sapiens 0 425
ENST00000515379 HNRNPA1P12-001 processed_pseudogene Homo_sapiens 0 562
ENST00000521273 HNRNPA1P7-001 processed_pseudogene Homo_sapiens 0 616
ENST00000521313 HNRNPA1P36-001 processed_pseudogene Homo_sapiens 0 472
ENST00000546500 HNRNPA1-001 protein_coding Homo_sapiens 0 621
ENST00000547276 HNRNPA1-012 protein_coding Homo_sapiens 0 375
ENST00000547566 HNRNPA1-006 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000547708 HNRNPA1-015 protein_coding Homo_sapiens 0 228
ENST00000547870 HNRNPA1-016 retained_intron Homo_sapiens 0 265
ENST00000548688 HNRNPA1-013 protein_coding Homo_sapiens 0 383
ENST00000550994 HNRNPA1-014 protein_coding Homo_sapiens 0 267
ENST00000551702 HNRNPA1-019 protein_coding Homo_sapiens 0 196
ENST00000562726 HNRNPA1P48-002 processed_transcript Homo_sapiens 0 616
ENST00000565308 HNRNPA1P48-001 transcribed_processed_pseudogene Homo_sapiens 0 616
ENST00000575692 HNRNPA1P16-001 processed_pseudogene Homo_sapiens 0 507
ENST00000580106 HNRNPA1P11-001 processed_pseudogene Homo_sapiens 0 411
ENST00000604027 HNRNPA1P67-001 processed_pseudogene Homo_sapiens 0 405

Loading