C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007W2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs290 VISTA 9606 6:98247607-98848574
GeneTranscriptPositionBiotype
ENSG00000184486 (POU3F2)
POU class 3 homeobox 2 		ENST00000328345 (POU3F2-001) 98834592-98839490 protein_coding
ENSG00000187472 (RP11-67P15.1)
 ENST00000340697 (RP11-67P15.1-001) 98780257-98793992 processed_pseudogene
ENSG00000271860 (RP11-436D23.1)
 ENST00000606913 (RP11-436D23.1-001) 97885501-98398863 lincRNA
ENST00000607032 (RP11-436D23.1-002) 97938789-98398771 lincRNA
ENST00000607823 (RP11-436D23.1-003) 97816709-98399872 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007W2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs290 VISTA 10090 4:22646231-23247172
GeneTranscriptPositionBiotype
ENSMUSG00000028244 (1700025O08Rik)
RIKEN cDNA 1700025O08 gene 		ENSMUST00000123729 (1700025O08Rik-001) 22928167-22938435 lincRNA
ENSMUSG00000080762 (Gm11879)
predicted gene 11879 		ENSMUST00000121885 (Gm11879-001) 22704057-22704758 processed_pseudogene
ENSMUSG00000083479 (Gm11883)
predicted gene 11883 		ENSMUST00000118005 (Gm11883-001) 22740349-22740675 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007W2_0001ENSG00000184486ENST00000328345ENSG00000187472ENST00000340697ENSG00000271860ENST00000606913ENST00000607032ENST00000607823CIL_0007W2_0002ENSMUSG00000028244ENSMUST00000123729ENSMUSG00000080762ENSMUST00000121885ENSMUSG00000083479ENSMUST00000118005
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007W2_0001ENSG00000184486ENST00000328345ENSG00000187472ENST00000340697ENSG00000271860ENST00000606913ENST00000607032ENST00000607823CIL_0007W2_0002ENSMUSG00000028244ENSMUST00000123729ENSMUSG00000080762ENSMUST00000121885ENSMUSG00000083479ENSMUST00000118005
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000184486 ENST00000328345 0.013±0.00 0.014±0.00 N/A 2.002±0.52 0.008±0.00 0.017±0.00 0.008±0.01 0.005±0.00 0.010±0.00 0.033±0.00 N/A 0.007±0.00 0.017±0.00 0.275±0.11
ENSG00000187472 ENST00000340697 0.049±0.00 0.157±0.00 N/A N/A 0.205±0.00 N/A N/A 0.051±0.00 N/A N/A N/A 0.595±0.00 N/A 0.136±0.00
ENSG00000271860 ENST00000606913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 0.059±0.00
ENST00000607032 N/A N/A N/A 0.485±0.00 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00
ENST00000607823 N/A N/A N/A 0.179±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028244 ENSMUST00000123729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.355±0.23
ENSMUSG00000080762 ENSMUST00000121885 N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083479 ENSMUST00000118005 1.722±0.61 2.270±0.40 0.800±0.20 1.666±0.72 1.762±0.78 2.104±0.75 2.336±0.90 2.120±0.71 0.915±0.64 4.881±2.95 0.370±0.09 2.241±1.15 1.191±0.31 0.640±0.26

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