C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007Y2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm407 VISTA 9606 7:25417811-26019241
GeneTranscriptPositionBiotype
ENSG00000223561 (AC003090.1)
 ENST00000423689 (AC003090.1-002) 25657071-25662941 lincRNA
ENST00000446840 (AC003090.1-001) 25593351-25663053 lincRNA
ENST00000456777 (AC003090.1-005) 25594533-25750994 lincRNA
ENSG00000239622 (CTA-242H14.1)
 ENST00000466070 (CTA-242H14.1-001) 25689580-25689959 processed_pseudogene
ENSG00000270933 (CTD-2227E11.1)
 ENST00000602992 (CTD-2227E11.1-001) 25948657-25949403 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007Y2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm407 VISTA 10090 6:50751772-51353273
GeneTranscriptPositionBiotype
ENSMUSG00000073072 (G930045G22Rik)
RIKEN cDNA G930045G22 gene 		ENSMUST00000101402 (G930045G22Rik-201) 50846713-50847770 protein_coding
ENSMUST00000161723 (G930045G22Rik-001) 50846524-50878079 protein_coding
ENSMUSG00000099538 (RP23-460N4.1)
predicted gene 29004 		ENSMUST00000187879 (RP23-460N4.1-001) 51003175-51004253 lincRNA

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Y2_0001ENSG00000223561ENST00000423689ENST00000446840ENST00000456777ENSG00000239622ENST00000466070ENSG00000270933ENST00000602992CIL_0007Y2_0002ENSMUSG00000073072ENSMUST00000101402ENSMUST00000161723ENSMUSG00000099538ENSMUST00000187879
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Y2_0001ENSG00000223561ENST00000423689ENST00000446840ENST00000456777ENSG00000239622ENST00000466070ENSG00000270933ENST00000602992CIL_0007Y2_0002ENSMUSG00000073072ENSMUST00000101402ENSMUST00000161723ENSMUSG00000099538ENSMUST00000187879
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000223561 ENST00000423689 N/A N/A N/A 0.096±0.00 0.171±0.00 0.279±0.00 0.071±0.00 N/A 0.052±0.00 N/A N/A N/A N/A N/A
ENST00000446840 0.019±0.00 N/A N/A 0.045±0.00 0.573±0.00 0.306±0.00 0.161±0.10 1.054±0.00 0.145±0.12 N/A N/A 0.113±0.06 0.046±0.02 1.420±0.32
ENST00000456777 N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A N/A
ENSG00000239622 ENST00000466070 N/A N/A N/A 0.128±0.00 0.924±0.00 N/A N/A N/A N/A 0.114±0.00 N/A N/A N/A 0.052±0.00
ENSG00000270933 ENST00000602992 0.664±0.00 0.602±0.00 0.595±0.00 N/A 0.058±0.02 0.075±0.00 0.050±0.00 1.185±0.53 0.441±0.03 0.441±0.19 N/A 1.733±0.28 N/A 0.131±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000073072 ENSMUST00000101402 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161723 N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A
ENSMUSG00000099538 ENSMUST00000187879 N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.192±0.00

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