C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00083O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1375 VISTA 9606 5:124694956-125297237
GeneTranscriptPositionBiotype
ENSG00000168916 (ZNF608)
zinc finger protein 608 		ENST00000306315 (ZNF608-001) 124636917-124745425 protein_coding
ENST00000503896 (ZNF608-007) 124643511-124744367 processed_transcript
ENST00000504926 (ZNF608-002) 124636916-124744521 protein_coding
ENST00000505686 (ZNF608-003) 124637278-124745081 nonsense_mediated_decay
ENST00000509799 (ZNF608-004) 124648237-124748807 protein_coding
ENST00000511308 (ZNF608-009) 124666271-124701269 processed_transcript
ENST00000512940 (ZNF608-008) 124744656-124746074 processed_transcript
ENST00000513985 (ZNF608-006) 124636913-124644337 processed_transcript
ENST00000513986 (ZNF608-005) 124648263-124746627 protein_coding
ENST00000613878 (ZNF608-201) 124636917-124745112 protein_coding
ENSG00000242814 (RP11-436H11.1)
 ENST00000464124 (RP11-436H11.1-001) 124808828-124809233 processed_pseudogene
ENSG00000248443 (RP11-284A20.3)
 ENST00000511091 (RP11-284A20.3-001) 124829472-124830290 lincRNA
ENSG00000249112 (RP11-43D2.2)
 ENST00000515092 (RP11-43D2.2-001) 124707827-124710737 antisense
ENSG00000249261 (RP11-284A20.2)
 ENST00000510242 (RP11-284A20.2-001) 124868972-124869914 lincRNA
ENSG00000249365 (RP11-508M8.1)
 ENST00000512965 (RP11-508M8.1-001) 125108204-125149929 lincRNA
ENSG00000249423 (RP11-284A20.1)
 ENST00000509456 (RP11-284A20.1-001) 124919947-124921598 lincRNA
ENSG00000250194 (RP11-257I8.1)
 ENST00000508858 (RP11-257I8.1-001) 125074665-125074980 processed_pseudogene
ENSG00000250411 (RP11-257I8.2)
 ENST00000513915 (RP11-257I8.2-001) 125036831-125042239 lincRNA
ENSG00000250721 (HMGB1P22)
high mobility group box 1 pseudogene 22 		ENST00000505315 (HMGB1P22-001) 125265528-125265651 processed_pseudogene
ENSG00000251456 (RP11-436H11.5)
 ENST00000507630 (RP11-436H11.5-001) 124734618-124735175 sense_intronic

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_00083O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1375 VISTA 10090 18:54895554-55497516
GeneTranscriptPositionBiotype
ENSMUSG00000052713 (Zfp608)
zinc finger protein 608 		ENSMUST00000064763 (Zfp608-201) 54888045-54990180 protein_coding
ENSMUSG00000096948 (Gm4221)
predicted gene 4221 		ENSMUST00000181538 (Gm4221-201) 54990310-55077337 lincRNA
ENSMUST00000181765 (Gm4221-202) 55057585-55079414 lincRNA
ENSMUSG00000097707 (Gm26742)
predicted gene, 26742 		ENSMUST00000181829 (Gm26742-201) 54981435-54987689 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00083O_0001ENSG00000168916ENST00000306315ENST00000503896ENST00000504926ENST00000505686ENST00000509799ENST00000511308ENST00000512940ENST00000513985ENST00000513986ENST00000613878ENSG00000242814ENST00000464124ENSG00000248443ENST00000511091ENSG00000249112ENST00000515092ENSG00000249261ENST00000510242ENSG00000249365ENST00000512965ENSG00000249423ENST00000509456ENSG00000250194ENST00000508858ENSG00000250411ENST00000513915ENSG00000250721ENST00000505315ENSG00000251456ENST00000507630CIL_00083O_0002ENSMUSG00000052713ENSMUST00000064763ENSMUSG00000096948ENSMUST00000181538ENSMUST00000181765ENSMUSG00000097707ENSMUST00000181829
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00083O_0001ENSG00000168916ENST00000306315ENST00000504926ENST00000509799ENST00000513985ENST00000513986ENST00000613878ENSG00000242814ENST00000464124ENSG00000248443ENST00000511091ENSG00000249112ENST00000515092ENSG00000249261ENST00000510242ENSG00000249365ENST00000512965ENSG00000249423ENST00000509456ENSG00000250194ENST00000508858ENSG00000250411ENST00000513915ENSG00000250721ENST00000505315ENSG00000251456ENST00000507630CIL_00083O_0002ENSMUSG00000052713ENSMUST00000064763ENSMUSG00000096948ENSMUST00000181538ENSMUST00000181765ENSMUSG00000097707ENSMUST00000181829
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168916 ENST00000306315 0.233±0.00 N/A N/A 0.738±0.00 N/A N/A N/A N/A N/A N/A N/A 0.446±0.00 N/A N/A
ENST00000503896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504926 0.399±0.00 0.953±0.00 0.857±0.00 1.227±0.69 0.691±0.00 1.085±0.00 0.433±0.24 1.387±0.00 0.107±0.00 0.944±0.00 1.830±0.00 1.396±0.79 0.700±0.50 7.068±3.18
ENST00000505686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509799 N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A 0.811±0.00 N/A N/A
ENST00000511308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513985 N/A N/A N/A 2.319±0.00 0.628±0.00 N/A N/A 0.838±0.00 0.295±0.00 N/A 0.239±0.00 N/A N/A N/A
ENST00000513986 N/A N/A 1.703±0.00 N/A N/A 1.714±0.00 N/A N/A N/A 2.047±0.00 N/A N/A N/A N/A
ENST00000613878 N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A 0.541±0.00 0.183±0.00 N/A
ENSG00000242814 ENST00000464124 1.553±0.00 1.396±0.00 N/A 0.455±0.00 0.802±0.00 1.526±0.00 0.369±0.00 0.292±0.00 0.248±0.00 0.499±0.00 0.522±0.00 0.705±0.00 0.090±0.00 0.826±0.26
ENSG00000248443 ENST00000511091 N/A 0.090±0.00 N/A 0.013±0.00 0.024±0.00 0.034±0.00 0.111±0.00 0.075±0.00 0.044±0.00 N/A N/A 0.046±0.00 N/A 0.036±0.00
ENSG00000249112 ENST00000515092 N/A 0.028±0.00 N/A 0.057±0.00 N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A 0.116±0.10
ENSG00000249261 ENST00000510242 N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A 0.501±0.00
ENSG00000249365 ENST00000512965 N/A N/A N/A N/A 0.396±0.00 N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A 0.150±0.04
ENSG00000249423 ENST00000509456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.705±0.17
ENSG00000250194 ENST00000508858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.177±0.00
ENSG00000250411 ENST00000513915 N/A 0.723±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.345±0.09
ENSG00000250721 ENST00000505315 N/A N/A N/A N/A N/A N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000251456 ENST00000507630 N/A N/A 0.410±0.00 0.032±0.00 0.317±0.00 N/A N/A N/A 0.332±0.00 2.442±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052713 ENSMUST00000064763 2.362±0.57 1.193±0.54 1.230±0.54 6.779±3.18 2.206±0.65 2.820±0.24 1.362±0.27 1.771±0.63 0.366±0.24 6.307±1.44 0.726±0.09 2.241±0.85 1.213±0.84 N/A
ENSMUSG00000096948 ENSMUST00000181538 0.265±0.07 0.347±0.13 0.082±0.02 0.118±0.04 0.384±0.24 0.176±0.09 0.124±0.04 0.117±0.07 0.050±0.04 0.542±0.38 N/A 0.377±0.27 0.056±0.03 0.130±0.09
ENSMUST00000181765 0.030±0.01 0.458±0.23 0.024±0.00 0.011±0.00 0.028±0.00 N/A 0.022±0.00 N/A 0.006±0.00 0.080±0.04 0.006±0.00 0.101±0.15 0.011±0.00 0.063±0.03
ENSMUSG00000097707 ENSMUST00000181829 N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.01 N/A N/A N/A N/A N/A

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