C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008BV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs397 VISTA 9606 2:59770242-60371906
GeneTranscriptPositionBiotype
ENSG00000223929 (AC007381.2)
 ENST00000441598 (AC007381.2-002) 60359720-60383036 lincRNA
ENST00000453476 (AC007381.2-001) 60359216-60391375 lincRNA
ENSG00000228590 (AC007381.3)
 ENST00000457668 (AC007381.3-001) 60350595-60353016 lincRNA
ENSG00000271955 (RP11-444A22.1)
 ENST00000606382 (RP11-444A22.1-001) 59218680-60100200 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008BV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs397 VISTA 10090 11:24184733-24786202
GeneTranscriptPositionBiotype
ENSMUSG00000073103 (Gm10466)
predicted gene 10466 		ENSMUST00000101450 (Gm10466-001) 24721006-24730722 lincRNA
ENSMUSG00000081767 (Gm12067)
predicted gene 12067 		ENSMUST00000119755 (Gm12067-001) 24552438-24553962 processed_pseudogene
ENSMUSG00000085579 (Gm12066)
predicted gene 12066 		ENSMUST00000123592 (Gm12066-001) 24201418-24217601 lincRNA
ENSMUSG00000086117 (Gm12065)
predicted gene 12065 		ENSMUST00000149592 (Gm12065-001) 24198737-24202624 lincRNA
ENSMUSG00000086892 (4933430M04Rik)
RIKEN cDNA 4933430M04 gene 		ENSMUST00000152726 (4933430M04Rik-001) 24481909-24569952 lincRNA
ENSMUSG00000087085 (Gm12068)
predicted gene 12068 		ENSMUST00000153153 (Gm12068-001) 24426246-24722646 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisCIL_0008BV_0001ENSG00000223929ENST00000441598ENST00000453476ENSG00000228590ENST00000457668ENSG00000271955ENST00000606382CIL_0008BV_0002ENSMUSG00000073103ENSMUST00000101450ENSMUSG00000081767ENSMUST00000119755ENSMUSG00000085579ENSMUST00000123592ENSMUSG00000086117ENSMUST00000149592ENSMUSG00000086892ENSMUST00000152726ENSMUSG00000087085ENSMUST00000153153
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisCIL_0008BV_0001ENSG00000223929ENST00000441598ENST00000453476ENSG00000228590ENST00000457668ENSG00000271955ENST00000606382CIL_0008BV_0002ENSMUSG00000073103ENSMUST00000101450ENSMUSG00000081767ENSMUST00000119755ENSMUSG00000085579ENSMUST00000123592ENSMUSG00000086117ENSMUST00000149592ENSMUSG00000086892ENSMUST00000152726ENSMUSG00000087085ENSMUST00000153153
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSG00000223929 ENST00000441598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.01
ENST00000453476 N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A 0.078±0.00 N/A
ENSG00000228590 ENST00000457668 N/A 0.167±0.00 N/A N/A N/A 0.061±0.02 N/A 0.293±0.00 N/A N/A N/A N/A
ENSG00000271955 ENST00000606382 N/A 0.286±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000073103 ENSMUST00000101450 N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A 0.034±0.01 0.011±0.00 N/A
ENSMUSG00000081767 ENSMUST00000119755 N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A 0.467±0.00 N/A N/A
ENSMUSG00000085579 ENSMUST00000123592 N/A N/A N/A 0.230±0.09 N/A N/A 0.090±0.07 N/A N/A 0.271±0.07 0.047±0.00 0.200±0.02
ENSMUSG00000086117 ENSMUST00000149592 0.077±0.00 N/A N/A 0.134±0.07 0.270±0.09 N/A 0.021±0.01 N/A N/A 0.679±0.19 N/A N/A
ENSMUSG00000086892 ENSMUST00000152726 N/A N/A 0.110±0.00 0.085±0.00 N/A N/A N/A N/A 0.048±0.00 0.205±0.11 0.008±0.00 0.092±0.05
ENSMUSG00000087085 ENSMUST00000153153 N/A N/A N/A N/A N/A N/A N/A N/A 0.191±0.00 0.655±0.40 N/A 0.157±0.03

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