C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008CL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1813 VISTA 9606 5:156110669-156712475
GeneTranscriptPositionBiotype
ENSG00000254163 (CTC-340I23.2)
 ENST00000520705 (CTC-340I23.2-001) 156704058-156739812 antisense
ENSG00000279646 (AC016577.1)
 ENST00000624963 (AC016577.1-201) 156658587-156660435 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
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Structures from Ensembl
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CIL_0008CL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1813 VISTA 10090 11:46983315-47585732
GeneTranscriptPositionBiotype
ENSMUSG00000082792 (Gm12176)
predicted gene 12176 		ENSMUST00000121420 (Gm12176-001) 47541432-47542306 processed_pseudogene
ENSMUSG00000082946 (Gm12177)
predicted gene 12177 		ENSMUST00000118506 (Gm12177-001) 47425264-47427259 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CL_0001ENSG00000254163ENST00000520705ENSG00000279646ENST00000624963CIL_0008CL_0002ENSMUSG00000082792ENSMUST00000121420ENSMUSG00000082946ENSMUST00000118506
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CL_0001ENSG00000254163ENST00000520705ENSG00000279646ENST00000624963CIL_0008CL_0002ENSMUSG00000082792ENSMUST00000121420ENSMUSG00000082946ENSMUST00000118506
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000254163 ENST00000520705 N/A 0.048±0.00 N/A 0.048±0.00 N/A N/A 0.090±0.00 N/A N/A N/A N/A 0.073±0.00 N/A 0.251±0.00
ENSG00000279646 ENST00000624963 N/A 0.088±0.00 0.591±0.00 0.184±0.00 0.960±0.43 N/A 0.283±0.00 0.091±0.00 0.348±0.00 N/A 0.740±0.00 3.079±2.19 0.448±0.00 0.352±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000082792 ENSMUST00000121420 0.041±0.00 N/A 0.002±0.00 0.305±0.11 0.051±0.00 0.076±0.00 0.041±0.00 N/A 0.018±0.00 N/A N/A N/A 0.134±0.08 0.032±0.00
ENSMUSG00000082946 ENSMUST00000118506 0.350±0.02 0.098±0.05 0.209±0.04 0.306±0.05 0.355±0.17 N/A 0.236±0.04 0.141±0.04 0.099±0.06 0.186±0.04 0.031±0.01 0.184±0.10 0.223±0.19 0.535±0.12

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